POPTR_0002s00730 (Populus trichocarpa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 POPTR_0002s00730 T295215_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC031
M07182_2.00 		Arabidopsis thaliana
NTWDCKTGTNNHWYACGY
RCGTRWDNNACAMGHWAN		 Dap-seq
OMalley et al.(2016)
CUC3_col_a 		0.935 0.798
NAC031
M07183_2.00 		Arabidopsis thaliana
CKTGTNNHDCACGYHA
TDRCGTGHDNNACAMG		 Dap-seq
OMalley et al.(2016)
CUC3_colamp_a 		0.935 0.798
NAC098
M07239_2.00 		Arabidopsis thaliana
CKTGTNNNDYAMGYHA
TDRCKTRHNNNACAMG		 Dap-seq
OMalley et al.(2016)
CUC2_colamp_a 		0.928 0.807
NAC098
M07240_2.00 		Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG
CKTGWDNNDCAMGNWANNN		 Dap-seq
OMalley et al.(2016)
CUC2_col 		0.928 0.807
NAC59
M11080_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANAC059_01 		0.903 0.754
NAC92
M00979_2.00 		Arabidopsis thaliana
NNDYACGBHA
TDVCGTRHNN		 PBM
Lindemose et al.(2014)
ANAC092 		0.895 0.772
NAC92
M00730_2.00 		Arabidopsis thaliana
DYACGNHAN
NTDNCGTRH		 PBM
Chang et al.(2013)
pTH7335 		0.895 0.772
NAC92
M07234_2.00 		Arabidopsis thaliana
TWNCKTGHNNHDCAMGYWAY
RTWRCKTGHDNNDCAMGNWA		 Dap-seq
OMalley et al.(2016)
ANAC092_colamp_a 		0.895 0.772
NAC92
M07235_2.00 		Arabidopsis thaliana
WRCKTGTNNNDCAMG
CKTGHNNNACAMGYW		 Dap-seq
OMalley et al.(2016)
ANAC092_col_v3a 		0.895 0.772
NAC100
M02375_2.00 		Arabidopsis thaliana
NBAMKNHWNN
NNWDNMKTVN		 PBM
Weirauch et al.(2014)
pTH7239 		0.892 0.763
ANAC100
M02377_2.00 		Arabidopsis lyrata
DYACGYHANN
NNTDRCGTRH		 PBM
Weirauch et al.(2014)
pTH9234 		0.888 0.763
ANAC080
M02376_2.00 		Arabidopsis lyrata
NBAMKNHWNN
NNWDNMKTVN		 PBM
Weirauch et al.(2014)
pTH9230 		0.886 0.763
NAC079
M02373_2.00 		Arabidopsis thaliana
TTGCGTRY
RYACGCAA		 PBM
Weirauch et al.(2014)
pTH7399 		0.886 0.746
NAC079
M07228_2.00 		Arabidopsis thaliana
CBWNHNNHACACGYWA
TWRCGTGTDNNDNWVG		 Dap-seq
OMalley et al.(2016)
ANAC079_colamp_a 		0.886 0.746
NAC079
M07229_2.00 		Arabidopsis thaliana
NTWNCKTVHNNHWCAMGYWAH
DTWRCKTGWDNNDBAMGNWAN		 Dap-seq
OMalley et al.(2016)
ANAC079_col 		0.886 0.746
e_gw1.288.15.1
M02381_2.00 		Physcomitrella patens
NNNBAMKNHW
WDNMKTVNNN		 PBM
Weirauch et al.(2014)
pTH8467 		0.874 0.737
e_gw1.327.11.1
M02382_2.00 		Physcomitrella patens
NTTDYRTWWN
NWWAYRHAAN		 PBM
Weirauch et al.(2014)
pTH8478 		0.873 0.728
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s00730.1 NAC/NAM 22 148

Links

Other NAC/NAM family TFs
Other Populus trichocarpa TFs

275 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Nfkb1 Mus musculus ENSMUSG00000028163 D
Nfkb2 Mus musculus ENSMUSG00000025225 D
NFKB2 Homo sapiens ENSG00000077150 D
NFKB2 Taeniopygia guttata ENSTGUG00000007491 I
NFKB2 Otolemur garnettii ENSOGAG00000016379 I
NFKB2 Ochotona princeps ENSOPRG00000006569 I
ENSPANG00000021013 Papio anubis ENSPANG00000021013 I
NFKB2 Procavia capensis ENSPCAG00000011503 I
ENSPPYG00000002599 Pongo abelii ENSPPYG00000002599 I
NFKB2 Pan troglodytes ENSPTRG00000002888 I
Nfkb2 Rattus norvegicus ENSRNOG00000019311 I
NFKB2 Sorex araneus ENSSARG00000006180 I
ENSSHAG00000018852 Sarcophilus harrisii ENSSHAG00000018852 I
NFKB2 Sus scrofa ENSSSCG00000010580 I
NFKB1 Sus scrofa ENSSSCG00000030957 I
ENSSTOG00000002191 Ictidomys tridecemlineatus ENSSTOG00000002191 I
ENSOANG00000030023 Ornithorhynchus anatinus ENSOANG00000030023 I
NFKB2 Tursiops truncatus ENSTTRG00000008357 I
Aan_R011824 Calypte anna Aan_R011824 I
Afo_R002575 Aptenodytes forsteri Afo_R002575 I
Alligator_sinensis_CCG009270.1 Alligator sinensis Alligator_sinensis_CCG009270.1 I
Brh_R009664 Buceros rhinoceros Brh_R009664 I
Cmyd_10006544 Chelonia mydas Cmyd_10006544 I
ENSBTAP00000007904-D1 Bos grunniens ENSBTAP00000007904-D1 I
ENSP00000189444 Macaca fascicularis ENSP00000189444 I
Gfo_R002459 Geospiza fortis Gfo_R002459 I
Myotis_brandtii_NFKB2_10025917 Myotis brandtii Myotis_brandtii_NFKB2_10025917 I
Ogr18048 Ophisaurus gracilis Ogr18048 I
Pvit_13855 Pogona vitticeps Pvit_13855 I
nfkb2 Xenopus tropicalis XB-GENE-970084 I
NFKB2 Gorilla gorilla ENSGGOG00000006971 I
ENSAMEG00000017735 Ailuropoda melanoleuca ENSAMEG00000017735 I
ENSAPLG00000013409 Anas platyrhynchos ENSAPLG00000013409 I
NFKB2 Bos taurus ENSBTAG00000006017 I
NFKB2 Canis familiaris ENSCAFG00000010155 I
NFKB2 Callithrix jacchus ENSCJAG00000017928 I
NFKB2 Cavia porcellus ENSCPOG00000004847 I
ENSCSAG00000005442 Chlorocebus sabaeus ENSCSAG00000005442 I
NFKB2 Dasypus novemcinctus ENSDNOG00000032784 I
Nfkb2 Dipodomys ordii ENSDORG00000013409 I
NFKB2 Echinops telfairi ENSETEG00000002347 I
ENSFALG00000007271 Ficedula albicollis ENSFALG00000007271 I
NFKB2 Felis catus ENSFCAG00000001242 I
NFKB2 Gallus gallus ENSGALG00000005653 I
NFKB2 Oryctolagus cuniculus ENSOCUG00000005735 I
NFKB2 Loxodonta africana ENSLAFG00000006805 I
ENSMEUG00000011176 Macropus eugenii ENSMEUG00000011176 I
ENSMGAG00000007084 Meleagris gallopavo ENSMGAG00000007084 I
NFKB2 Microcebus murinus ENSMICG00000011856 I
NFKB2 Myotis lucifugus ENSMLUG00000006287 I
NFKB2 Macaca mulatta ENSMMUG00000002990 I
ENSMPUG00000016882 Mustela putorius furo ENSMPUG00000016882 I
ENSNLEG00000015079 Nomascus leucogenys ENSNLEG00000015079 I
ENSOANG00000006254 Ornithorhynchus anatinus ENSOANG00000006254 I
ENSOANG00000028755 Ornithorhynchus anatinus ENSOANG00000028755 I
NFKB2 Anolis carolinensis ENSACAG00000014215 I
ENSOARG00000000483 Ovis aries ENSOARG00000000483 I