POPTR_0004s18860 (Populus trichocarpa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 POPTR_0004s18860 T295244_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0004s18860.1 NAC/NAM 10 137

Links

Other NAC/NAM family TFs
Other Populus trichocarpa TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10003333.g Linum usitatissimum Lus10003333.g N 0.933
Bostr.18351s0165 Boechera stricta Bostr.18351s0165 N 0.902
Cagra.0805s0005 Capsella grandiflora Cagra.0805s0005 N 0.907
Carubv10014350m.g Capsella rubella Carubv10014350m.g N 0.907
Ciclev10029007m.g Citrus clementina Ciclev10029007m.g N 0.928
Eucgr.I01494 Eucalyptus grandis Eucgr.I01494 N 0.943
evm.TU.supercontig_320.2 Carica papaya evm.TU.supercontig_320.2 N 0.942
gene17203-v1.0-hybrid Fragaria vesca gene17203-v1.0-hybrid N 0.935
Gorai.002G001900 Gossypium raimondii Gorai.002G001900 N 0.902
Gorai.005G257800 Gossypium raimondii Gorai.005G257800 N 0.961
Gorai.008G038800 Gossypium raimondii Gorai.008G038800 N 0.942
Aquca_015_00469 Aquilegia coerulea Aquca_015_00469 N 0.904
Lus10022636.g Linum usitatissimum Lus10022636.g N 0.928
Lus10023966.g Linum usitatissimum Lus10023966.g N 0.914
Lus10025118.g Linum usitatissimum Lus10025118.g N 0.908
MDP0000480581 Malus domestica MDP0000480581 N 0.950
MDP0000868556 Malus domestica MDP0000868556 N 0.950
orange1.1g023427m.g Citrus sinensis orange1.1g023427m.g N 0.928
SapurV1A.0080s0480 Salix purpurea SapurV1A.0080s0480 N 0.975
SapurV1A.0218s0020 Salix purpurea SapurV1A.0218s0020 N 0.958
Thhalv10022800m.g Eutrema salsugineum Thhalv10022800m.g N 0.910
chr3.CM0460.350.nd Lotus japonicus chr3.CM0460.350.nd N 0.917
TCM_006499 Theobroma cacao TCM_006499 N 0.951
Bo3g092020 Brassica oleracea Bo3g092020 N 0.915
Bo7g015050 Brassica oleracea Bo7g015050 N 0.917
Bra002018 Brassica rapa Bra002018 N 0.896
Bra013034 Brassica rapa Bra013034 N 0.915
anac036 Arabidopsis lyrata fgenesh2_kg.3__3291__AT2G17040.1 N 0.935
GLYMA11G10230 Glycine max GLYMA11G10230 N 0.913
GLYMA12G02540 Glycine max GLYMA12G02540 N 0.913
MTR_4g075980 Medicago truncatula MTR_4g075980 N 0.916
POPTR_0009s14370 Populus trichocarpa POPTR_0009s14370 N 0.961
PRUPE_ppa009455mg Prunus persica PRUPE_ppa009455mg N 0.941
anac036 Arabidopsis thaliana AT2G17040 N 0.935
anac036 Vitis vinifera VIT_03s0038g03410 N 0.882
VIT_04s0008g00150 Vitis vinifera VIT_04s0008g00150 N 0.907
Ca_11128 Cicer arietinum Ca_11128 N 0.907
Cla007018 Citrullus lanatus Cla007018 N 0.883
Pm020961 Prunus mume Pm020961 N 0.941
29797.m000353 Ricinus communis 29797.m000353 N 0.939
cassava13355.valid.m1 Manihot esculenta cassava13355.valid.m1 N 0.966
cassava30341.valid.m1 Manihot esculenta cassava30341.valid.m1 N 0.951
mgf013168m Mimulus guttatus mgf013168m N 0.905