CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Pm011397 *(Prunus mume)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF02365 (NAM)	IPR003441	Pm011397	T296647_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
NAC098 M07239_2.00	Arabidopsis thaliana	CKTGTNNNDYAMGYHA	TDRCKTRHNNNACAMG	Dap-seq OMalley et al.(2016) CUC2_colamp_a	0.953	0.912
NAC098 M07240_2.00	Arabidopsis thaliana	NNNTWNCKTGHNNHWCAMG	CKTGWDNNDCAMGNWANNN	Dap-seq OMalley et al.(2016) CUC2_col	0.953	0.912
NAC079 M02373_2.00	Arabidopsis thaliana	TTGCGTRY	RYACGCAA	PBM Weirauch et al.(2014) pTH7399	0.937	0.825
NAC079 M07228_2.00	Arabidopsis thaliana	CBWNHNNHACACGYWA	TWRCGTGTDNNDNWVG	Dap-seq OMalley et al.(2016) ANAC079_colamp_a	0.937	0.825
NAC079 M07229_2.00	Arabidopsis thaliana	NTWNCKTVHNNHWCAMGYWAH	DTWRCKTGWDNNDBAMGNWAN	Dap-seq OMalley et al.(2016) ANAC079_col	0.937	0.825
ANAC080 M02376_2.00	Arabidopsis lyrata	NBAMKNHWNN	NNWDNMKTVN	PBM Weirauch et al.(2014) pTH9230	0.937	0.842
NAC100 M02375_2.00	Arabidopsis thaliana	NBAMKNHWNN	NNWDNMKTVN	PBM Weirauch et al.(2014) pTH7239	0.934	0.842
e_gw1.288.15.1 M02381_2.00	Physcomitrella patens	NNNBAMKNHW	WDNMKTVNNN	PBM Weirauch et al.(2014) pTH8467	0.934	0.833
ANAC100 M02377_2.00	Arabidopsis lyrata	DYACGYHANN	NNTDRCGTRH	PBM Weirauch et al.(2014) pTH9234	0.930	0.842
NAC59 M11080_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ANAC059_01	0.927	0.798
NAC92 M00979_2.00	Arabidopsis thaliana	NNDYACGBHA	TDVCGTRHNN	PBM Lindemose et al.(2014) ANAC092	0.926	0.807
NAC92 M00730_2.00	Arabidopsis thaliana	DYACGNHAN	NTDNCGTRH	PBM Chang et al.(2013) pTH7335	0.926	0.807
NAC92 M07234_2.00	Arabidopsis thaliana	TWNCKTGHNNHDCAMGYWAY	RTWRCKTGHDNNDCAMGNWA	Dap-seq OMalley et al.(2016) ANAC092_colamp_a	0.926	0.807
NAC92 M07235_2.00	Arabidopsis thaliana	WRCKTGTNNNDCAMG	CKTGHNNNACAMGYW	Dap-seq OMalley et al.(2016) ANAC092_col_v3a	0.926	0.807
NAC054 M07205_2.00	Arabidopsis thaliana	CKTVHNNHRCACGYHANCW	WGNTDRCGTGYDNNDBAMG	Dap-seq OMalley et al.(2016) CUC1_colamp_a	0.915	0.868
NAC054 M07206_2.00	Arabidopsis thaliana	TWNCKTGHNNNDCAMG	CKTGHNNNDCAMGNWA	Dap-seq OMalley et al.(2016) CUC1_col_v31	0.915	0.868
e_gw1.327.11.1 M02382_2.00	Physcomitrella patens	NTTDYRTWWN	NWWAYRHAAN	PBM Weirauch et al.(2014) pTH8478	0.910	0.754
ANAC087 M07232_2.00	Arabidopsis thaliana	TDNCKTSHNNNDYACGYHANB	VNTDRCGTRHNNNDSAMGNHA	Dap-seq OMalley et al.(2016) ANAC087_colamp_a	0.909	0.781
ANAC087 M07233_2.00	Arabidopsis thaliana	TWNCKTGWNNNDCAMGYHA	TDRCKTGHNNNWCAMGNWA	Dap-seq OMalley et al.(2016) ANAC087_col_v3a	0.909	0.781
NAC031 M07182_2.00	Arabidopsis thaliana	NTWDCKTGTNNHWYACGY	RCGTRWDNNACAMGHWAN	Dap-seq OMalley et al.(2016) CUC3_col_a	0.908	0.711
NAC031 M07183_2.00	Arabidopsis thaliana	CKTGTNNHDCACGYHA	TDRCGTGHDNNACAMG	Dap-seq OMalley et al.(2016) CUC3_colamp_a	0.908	0.711
ANAC038 M07188_2.00	Arabidopsis thaliana	DNCKTRHNNHDCAMGYWA	TWRCKTGHDNNDYAMGNH	Dap-seq OMalley et al.(2016) ANAC038_col_a	0.899	0.798
ANAC038 M07189_2.00	Arabidopsis thaliana	TTDCTTGWNNHDYAMGHHAHH	DDTDDCKTRHDNNWCAAGHAA	Dap-seq OMalley et al.(2016) ANAC038_colamp_a	0.899	0.798
anac058 M00886_2.00	Arabidopsis thaliana	CGTTGTCT	AGACAACG	PBM Franco-Zorrilla et al.(2014) ANAC58	0.898	0.825
anac058 M07210_2.00	Arabidopsis thaliana	CKTGHNNNRCAMGYWA	TWRCKTGYNNNDCAMG	Dap-seq OMalley et al.(2016) ANAC058_col_a	0.898	0.825
anac058 M07211_2.00	Arabidopsis thaliana	TDCKTGHNNNDCAMGHHA	TDDCKTGHNNNDCAMGHA	Dap-seq OMalley et al.(2016) ANAC058_colamp_a	0.898	0.825
e_gw1.159.34.1 M02379_2.00	Physcomitrella patens	DYACGNHANN	NNTDNCGTRH	PBM Weirauch et al.(2014) pTH8477	0.892	0.772
For this family, TFs with SR scores > 0.870* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Pm011397	NAC/NAM	19	145	PPGFRFHPTDEELITYYLLKKVLDSSFTGRAIAEVDLNKCEPWELPDKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCALVGMKKTLVFYRGRAPKGEKSNWVMHEYRL

Links
Other NAC/NAM family TFs
Other *Prunus mume* TFs

461 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ENSDNOG00000033746	Dasypus novemcinctus	ENSDNOG00000033746	I
ENSDNOG00000041460	Dasypus novemcinctus	ENSDNOG00000041460	I
ACOM031533	Anopheles coluzzii	ACOM031533	I
CpipJ_CPIJ017345	Culex pipiens	CpipJ_CPIJ017345	N
CPIJ014669	Culex quinquefasciatus	CPIJ014669	N
CPIJ017345	Culex quinquefasciatus	CPIJ017345	N

Pm011397 (Prunus mume) NAC/NAM

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

461 Related TFs

Pm011397 **(Prunus mume)
NAC/NAM**