CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene24342-v1.0-hybrid
(
Fragaria vesca
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
gene24342-v1.0-hybrid
T297988_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna24342.1-v1.0-hybrid
NAC/NAM
9
141
LPGVRFCPMEDELLLFYLKPMLSGQNVLGRNKVVFDCDLYGQQEPWEIWEAYKTKRPNDLRLHKDLYFFTQHKKMKSTDKRIRRTVGSGTWKGNDSGKPVKSSGRKIGLKKRFTYGNEKSKHHGCWILHEFYL
Links
Other
NAC/NAM
family TFs
Other
Fragaria vesca
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_53640
Hordeum vulgare
MLOC_53640
I
F775_24174
Aegilops tauschii
F775_24174
N
GLYMA10G04250
Glycine max
GLYMA10G04250
N
PRUPE_ppa018086mg
Prunus persica
PRUPE_ppa018086mg
N
VIT_14s0036g00460
Vitis vinifera
VIT_14s0036g00460
N
29680.m001686
Ricinus communis
29680.m001686
N
30005.m001298
Ricinus communis
30005.m001298
N
Carubv10010717m.g
Capsella rubella
Carubv10010717m.g
N
Ciclev10022991m.g
Citrus clementina
Ciclev10022991m.g
N
Pavir.Ga01179
Panicum virgatum
Pavir.Ga01179
N
chr1.CM0600.130.nd
Lotus japonicus
chr1.CM0600.130.nd
N