CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gene24342-v1.0-hybrid
(
Fragaria vesca
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
gene24342-v1.0-hybrid
T297988_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna24342.1-v1.0-hybrid
NAC/NAM
9
141
LPGVRFCPMEDELLLFYLKPMLSGQNVLGRNKVVFDCDLYGQQEPWEIWEAYKTKRPNDLRLHKDLYFFTQHKKMKSTDKRIRRTVGSGTWKGNDSGKPVKSSGRKIGLKKRFTYGNEKSKHHGCWILHEFYL
Links
Other
NAC/NAM
family TFs
Other
Fragaria vesca
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene22722-v1.0-hybrid
Fragaria vesca
gene22722-v1.0-hybrid
N
0.996
gene22723-v1.0-hybrid
Fragaria vesca
gene22723-v1.0-hybrid
N
0.996
gene24344-v1.0-hybrid
Fragaria vesca
gene24344-v1.0-hybrid
N
0.992
gene20500-v1.0-hybrid
Fragaria vesca
gene20500-v1.0-hybrid
N
0.966
gene20482-v1.0-hybrid
Fragaria vesca
gene20482-v1.0-hybrid
N
0.933
gene00151-v1.0-hybrid
Fragaria vesca
gene00151-v1.0-hybrid
N
0.906
gene03910-v1.0-hybrid
Fragaria vesca
gene03910-v1.0-hybrid
N
0.905
gene08427-v1.0-hybrid
Fragaria vesca
gene08427-v1.0-hybrid
N
0.899
Pm001409
Prunus mume
Pm001409
N
0.886
MDP0000772731
Malus domestica
MDP0000772731
N
0.879
MDP0000911336
Malus domestica
MDP0000911336
N
0.879
gene29106-v1.0-hybrid
Fragaria vesca
gene29106-v1.0-hybrid
N
0.875