CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm001409
(
Prunus mume
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pm001409
T296619_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm001409
NAC/NAM
12
145
PPGYHFYPSEEELLLYYLRPKVNGEEVPGENHVVFDFNLYSDQPRKIWDHFQTTRQNDLKMSNDLYFFTELQTKTTNGSRVSRTAGGGTWKGEDGGKKIYAPGTDHVIGIKKRFRYENKGSAEHGRWLMHEFEL
Links
Other
NAC/NAM
family TFs
Other
Prunus mume
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa019846mg
Prunus persica
PRUPE_ppa019846mg
N
0.986
PRUPE_ppa023583mg
Prunus persica
PRUPE_ppa023583mg
N
0.986
MDP0000772731
Malus domestica
MDP0000772731
N
0.977
MDP0000911336
Malus domestica
MDP0000911336
N
0.977
MDP0000285555
Malus domestica
MDP0000285555
I
0.946
MDP0000206868
Malus domestica
MDP0000206868
I
0.925
gene00151-v1.0-hybrid
Fragaria vesca
gene00151-v1.0-hybrid
N
0.916
MDP0000882033
Malus domestica
MDP0000882033
N
0.913
TCM_044639
Theobroma cacao
TCM_044639
N
0.896
29908.m006143
Ricinus communis
29908.m006143
N
0.896
gene22722-v1.0-hybrid
Fragaria vesca
gene22722-v1.0-hybrid
N
0.894
gene22723-v1.0-hybrid
Fragaria vesca
gene22723-v1.0-hybrid
N
0.894
Pm013492
Prunus mume
Pm013492
N
0.893
PRUPE_ppa025721mg
Prunus persica
PRUPE_ppa025721mg
N
0.890
Pm003866
Prunus mume
Pm003866
N
0.887
gene08427-v1.0-hybrid
Fragaria vesca
gene08427-v1.0-hybrid
N
0.887
gene24342-v1.0-hybrid
Fragaria vesca
gene24342-v1.0-hybrid
N
0.886
PRUPE_ppa015761mg
Prunus persica
PRUPE_ppa015761mg
N
0.885
gene24344-v1.0-hybrid
Fragaria vesca
gene24344-v1.0-hybrid
N
0.884