Pavir.Ib03261 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Ib03261 T298912_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib03261.1.p NAC/NAM 11 137

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G140901 Zea mays GRMZM2G140901 I 0.901
GRMZM5G857701 Zea mays GRMZM5G857701 I 0.889
LPERR02G30240 Leersia perrieri LPERR02G30240 I 0.930
OGLUM02G38020 Oryza glumaepatula OGLUM02G38020 I 0.937
Sb04g036640 Sorghum bicolor Sb04g036640 I 0.928
Si017967m.g Setaria italica Si017967m.g I 0.927
Traes_6BL_D00F04562 Triticum aestivum Traes_6BL_D00F04562 I 0.933
Pavir.Aa00144 Panicum virgatum Pavir.Aa00144 I 0.928
Pavir.J34679 Panicum virgatum Pavir.J34679 I 0.928
anac074 Arabidopsis thaliana AT4G28530 N 0.876
BGIOSGA009257 Oryza indica BGIOSGA009257 N 0.937
BGIOSGA016756 Oryza indica BGIOSGA016756 N 0.935
BGIOSGA033132 Oryza indica BGIOSGA033132 N 0.907
Bo8g054390 Brassica oleracea Bo8g054390 N 0.882
Bra010362 Brassica rapa Bra010362 N 0.882
Bra011037 Brassica rapa Bra011037 N 0.874
Bra024194 Brassica rapa Bra024194 N 0.875
BRADI3G54817 Brachypodium distachyon BRADI3G54817 N 0.915
BRADI5G15587 Brachypodium distachyon BRADI5G15587 N 0.924
F775_08585 Aegilops tauschii F775_08585 N 0.937
F775_17109 Aegilops tauschii F775_17109 N 0.936
anac074 Arabidopsis lyrata fgenesh2_kg.7__1345__AT4G28530.1 N 0.874
GLYMA03G32116 Glycine max GLYMA03G32116 N 0.909
GLYMA10G04350 Glycine max GLYMA10G04350 N 0.915
GLYMA13G18620 Glycine max GLYMA13G18620 N 0.915
GLYMA19G34881 Glycine max GLYMA19G34881 N 0.918
GRMZM2G043813 Zea mays GRMZM2G043813 N 0.920
GRMZM2G062009 Zea mays GRMZM2G062009 N 0.933
GRMZM2G081930 Zea mays GRMZM2G081930 N 0.930
GSMUA_Achr11G00880_001 Musa acuminata GSMUA_Achr11G00880_001 N 0.928
GSMUA_Achr11G22760_001 Musa acuminata GSMUA_Achr11G22760_001 N 0.909
GSMUA_Achr1G10860_001 Musa acuminata GSMUA_Achr1G10860_001 N 0.917
GSMUA_Achr1G20530_001 Musa acuminata GSMUA_Achr1G20530_001 N 0.916
GSMUA_Achr5G18670_001 Musa acuminata GSMUA_Achr5G18670_001 N 0.941
GSMUA_Achr8G18980_001 Musa acuminata GSMUA_Achr8G18980_001 N 0.929
GSMUA_AchrUn_randomG02760_001 Musa acuminata GSMUA_AchrUn_randomG02760_001 N 0.937
LPERR02G20100 Leersia perrieri LPERR02G20100 N 0.891
LPERR10G09740 Leersia perrieri LPERR10G09740 N 0.917
MLOC_12466 Hordeum vulgare MLOC_12466 N 0.924
MLOC_5165 Hordeum vulgare MLOC_5165 N 0.943
MTR_1g069805 Medicago truncatula MTR_1g069805 N 0.899
MTR_7g097090 Medicago truncatula MTR_7g097090 N 0.909
OB0039G10090 Oryza brachyantha OB0039G10090 N 0.927
OB02G31950 Oryza brachyantha OB02G31950 N 0.914
OB02G43380 Oryza brachyantha OB02G43380 N 0.937
OB04G25790 Oryza brachyantha OB04G25790 N 0.935
OBART02G24560 Oryza barthii OBART02G24560 N 0.916
OBART02G36830 Oryza barthii OBART02G36830 N 0.937
OBART04G18700 Oryza barthii OBART04G18700 N 0.935
OBART10G13230 Oryza barthii OBART10G13230 N 0.912
OGLUM02G24950 Oryza glumaepatula OGLUM02G24950 N 0.905
OGLUM04G18750 Oryza glumaepatula OGLUM04G18750 N 0.935
OGLUM10G13040 Oryza glumaepatula OGLUM10G13040 N 0.912
OLONG_000596 Oryza longistaminata OLONG_000596 N 0.898
OLONG_011232 Oryza longistaminata OLONG_011232 N 0.932
OLONG_025417 Oryza longistaminata OLONG_025417 N 0.912
OMERI02G24100 Oryza meridionalis OMERI02G24100 N 0.905
OMERI02G34720 Oryza meridionalis OMERI02G34720 N 0.937
OMERI10G10050 Oryza meridionalis OMERI10G10050 N 0.912
ONIVA02G26880 Oryza nivara ONIVA02G26880 N 0.905
ONIVA02G39640 Oryza nivara ONIVA02G39640 N 0.937
ONIVA04G01950 Oryza nivara ONIVA04G01950 N 0.935
ONIVA10G14530 Oryza nivara ONIVA10G14530 N 0.912
OPUNC02G33860 Oryza punctata OPUNC02G33860 N 0.937
OPUNC03G00610 Oryza punctata OPUNC03G00610 N 0.880
OPUNC04G16450 Oryza punctata OPUNC04G16450 N 0.935
OPUNC10G11640 Oryza punctata OPUNC10G11640 N 0.912
ORGLA02G0320500 Oryza glaberrima ORGLA02G0320500 N 0.937
ORGLA04G0158100 Oryza glaberrima ORGLA04G0158100 N 0.935
ORUFI02G25930 Oryza rufipogon ORUFI02G25930 N 0.903
ORUFI02G38340 Oryza rufipogon ORUFI02G38340 N 0.937
ORUFI04G20200 Oryza rufipogon ORUFI04G20200 N 0.935
ORUFI10G14000 Oryza rufipogon ORUFI10G14000 N 0.912
OS02G0810900 Oryza sativa OS02G0810900 N 0.937
OS04G0515900 Oryza sativa OS04G0515900 N 0.935
OS10G0477600 Oryza sativa OS10G0477600 N 0.907
PGSC0003DMG400010294 Solanum tuberosum PGSC0003DMG400010294 N 0.894
PGSC0003DMG400025505 Solanum tuberosum PGSC0003DMG400025505 N 0.911
PRUPE_ppa009628mg Prunus persica PRUPE_ppa009628mg N 0.911
Sb04g026440 Sorghum bicolor Sb04g026440 N 0.936
Si010799m.g Setaria italica Si010799m.g N 0.929
Si018001m.g Setaria italica Si018001m.g N 0.934
Si036835m.g Setaria italica Si036835m.g N 0.965
Solyc06g008360.2 Solanum lycopersicum Solyc06g008360.2 N 0.915
Solyc09g025310.2 Solanum lycopersicum Solyc09g025310.2 N 0.902
TCM_003998 Theobroma cacao TCM_003998 N 0.906
Traes_2BL_D718E27A9 Triticum aestivum Traes_2BL_D718E27A9 N 0.922
Traes_6AL_B272C86BE Triticum aestivum Traes_6AL_B272C86BE N 0.928
Traes_6AL_B92597EA9 Triticum aestivum Traes_6AL_B92597EA9 N 0.940
Traes_6BL_99F790D57 Triticum aestivum Traes_6BL_99F790D57 N 0.938
Traes_6DL_1ABE78799 Triticum aestivum Traes_6DL_1ABE78799 N 0.936
Traes_6DL_8A1342D56 Triticum aestivum Traes_6DL_8A1342D56 N 0.937
TRIUR3_23299 Triticum urartu TRIUR3_23299 N 0.928
TRIUR3_32754 Triticum urartu TRIUR3_32754 N 0.940
TRIUR3_33179 Triticum urartu TRIUR3_33179 N 0.922
Ca_07743 Cicer arietinum Ca_07743 N 0.900
Pm020580 Prunus mume Pm020580 N 0.911
cassava41082.m1 Manihot esculenta cassava41082.m1 N 0.907
mgf009162m Mimulus guttatus mgf009162m N 0.890
mgf018312m Mimulus guttatus mgf018312m N 0.918
Aquca_017_00744 Aquilegia coerulea Aquca_017_00744 N 0.904
Cagra.1225s0038 Capsella grandiflora Cagra.1225s0038 N 0.874
Carubv10005139m.g Capsella rubella Carubv10005139m.g N 0.874
Ciclev10021312m.g Citrus clementina Ciclev10021312m.g N 0.909
Eucgr.K03256 Eucalyptus grandis Eucgr.K03256 N 0.915
gene08112-v1.0-hybrid Fragaria vesca gene08112-v1.0-hybrid N 0.916
Gorai.001G178800 Gossypium raimondii Gorai.001G178800 N 0.909
Gorai.001G254300 Gossypium raimondii Gorai.001G254300 N 0.906
Gorai.004G221300 Gossypium raimondii Gorai.004G221300 N 0.880
Gorai.007G147300 Gossypium raimondii Gorai.007G147300 N 0.915
Lus10022915.g Linum usitatissimum Lus10022915.g N 0.876
Lus10033905.g Linum usitatissimum Lus10033905.g N 0.873
MDP0000697030 Malus domestica MDP0000697030 N 0.911
Pavir.Aa01668 Panicum virgatum Pavir.Aa01668 N 0.936
Pavir.Ab02337 Panicum virgatum Pavir.Ab02337 N 0.929
Pavir.Ga01251 Panicum virgatum Pavir.Ga01251 N 0.932
Pavir.Gb00655 Panicum virgatum Pavir.Gb00655 N 0.934
Pavir.J11268 Panicum virgatum Pavir.J11268 N 0.954
SapurV1A.0006s0680 Salix purpurea SapurV1A.0006s0680 N 0.902
SapurV1A.0233s0110 Salix purpurea SapurV1A.0233s0110 N 0.893
Thhalv10025606m.g Eutrema salsugineum Thhalv10025606m.g N 0.874
PK19051.1 Cannabis sativa PK19051.1 N 0.918
PDK_20s1301681g003 Phoenix dactylifera PDK_20s1301681g003 N 0.937
PDK_20s1648061g001 Phoenix dactylifera PDK_20s1648061g001 N 0.907