CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0063s0620
(
Salix purpurea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
SapurV1A.0063s0620
T299039_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC029
M00973_2.00
Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN
PBM
Lindemose et al.(2014)
NAP
0.909
0.838
NAC029
M02369_2.00
Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN
PBM
Weirauch et al.(2014)
pTH8397
0.909
0.838
NAC029
M07180_2.00
Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN
Dap-seq
OMalley et al.(2016)
NAP_colamp_a
0.909
0.838
NAC029
M07181_2.00
Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW
Dap-seq
OMalley et al.(2016)
NAP_col_v3a
0.909
0.838
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0063s0620.1.p
NAC/NAM
11
135
PPGFRFHPTDEELIVYYLRNQATSRPCPASIIPEFDIYKFDPWQLPEKAEFGENEWYFFTPLDRKYPNGVRPNRATVSGYWKATGTDKAIHSGSKYVGVKKALVFYKGRPPKGTKTDWIMQEYRL
Links
Other
NAC/NAM
family TFs
Other
Salix purpurea
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NAC029
Arabidopsis thaliana
AT1G69490
D
0.909
Gorai.005G142300
Gossypium raimondii
Gorai.005G142300
I
0.940
Cucsa.284890
Cucumis sativus
Cucsa.284890
I
0.933
mgf016848m
Mimulus guttatus
mgf016848m
I
0.911
mgf022118m
Mimulus guttatus
mgf022118m
I
0.943
Aquca_002_00663
Aquilegia coerulea
Aquca_002_00663
I
0.908
Bostr.10273s0418
Boechera stricta
Bostr.10273s0418
I
0.909
Cagra.0887s0008
Capsella grandiflora
Cagra.0887s0008
I
0.909
Carubv10020776m.g
Capsella rubella
Carubv10020776m.g
I
0.909
Ciclev10032304m.g
Citrus clementina
Ciclev10032304m.g
I
0.945
Eucgr.B03208
Eucalyptus grandis
Eucgr.B03208
I
0.888
Eucgr.G02486
Eucalyptus grandis
Eucgr.G02486
I
0.939
evm.TU.supercontig_1.48
Carica papaya
evm.TU.supercontig_1.48
I
0.921
cassava1317.valid.m1
Manihot esculenta
cassava1317.valid.m1
I
0.941
Gorai.008G179900
Gossypium raimondii
Gorai.008G179900
I
0.942
Lus10026617.g
Linum usitatissimum
Lus10026617.g
I
0.894
Lus10030446.g
Linum usitatissimum
Lus10030446.g
I
0.894
Lus10036773.g
Linum usitatissimum
Lus10036773.g
I
0.939
Lus10037156.g
Linum usitatissimum
Lus10037156.g
I
0.933
MDP0000262990
Malus domestica
MDP0000262990
I
0.941
MDP0000481448
Malus domestica
MDP0000481448
I
0.947
orange1.1g023197m.g
Citrus sinensis
orange1.1g023197m.g
I
0.945
SapurV1A.0063s0610
Salix purpurea
SapurV1A.0063s0610
I
0.968
SapurV1A.0801s0090
Salix purpurea
SapurV1A.0801s0090
I
0.954
Thhalv10018997m.g
Eutrema salsugineum
Thhalv10018997m.g
I
0.909
PK25119.1
Cannabis sativa
PK25119.1
I
0.945
PGSC0003DMG400018435
Solanum tuberosum
PGSC0003DMG400018435
I
0.940
Bo6g095510
Brassica oleracea
Bo6g095510
I
0.895
Bo6g108930
Brassica oleracea
Bo6g108930
I
0.914
Bra004385
Brassica rapa
Bra004385
I
0.914
NAP
Arabidopsis lyrata
fgenesh2_kg.2__1206__AT1G69490.1
I
0.909
GLYMA01G06150
Glycine max
GLYMA01G06150
I
0.931
GLYMA02G12220
Glycine max
GLYMA02G12220
I
0.934
GLYMA07G35630
Glycine max
GLYMA07G35630
I
0.937
GLYMA20G04400
Glycine max
GLYMA20G04400
I
0.940
MTR_4g081870
Medicago truncatula
MTR_4g081870
I
0.934
MTR_5g041940
Medicago truncatula
MTR_5g041940
I
0.897
PGSC0003DMG400002824
Solanum tuberosum
PGSC0003DMG400002824
I
0.946
29813.m001519
Ricinus communis
29813.m001519
I
0.944
POPTR_0008s08850
Populus trichocarpa
POPTR_0008s08850
I
0.952
POPTR_0010s17350
Populus trichocarpa
POPTR_0010s17350
I
0.963
PRUPE_ppa009530mg
Prunus persica
PRUPE_ppa009530mg
I
0.948
Solyc04g005610.2
Solanum lycopersicum
Solyc04g005610.2
I
0.926
Solyc05g007770.2
Solanum lycopersicum
Solyc05g007770.2
I
0.934
TCM_011671
Theobroma cacao
TCM_011671
I
0.922
NAP
Vitis vinifera
VIT_01s0026g02710
I
0.942
Ca_16379
Cicer arietinum
Ca_16379
I
0.916
Ca_18090
Cicer arietinum
Ca_18090
I
0.915
Cla010367
Citrullus lanatus
Cla010367
I
0.933
Pm006470
Prunus mume
Pm006470
I
0.948