chr2.CM0641.320.nc (Lotus japonicus)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 chr2.CM0641.320.nc T299390_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC029
M00973_2.00 		Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN		 PBM
Lindemose et al.(2014)
NAP 		0.894 0.857
NAC029
M02369_2.00 		Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN		 PBM
Weirauch et al.(2014)
pTH8397 		0.894 0.857
NAC029
M07180_2.00 		Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN		 Dap-seq
OMalley et al.(2016)
NAP_colamp_a 		0.894 0.857
NAC029
M07181_2.00 		Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW		 Dap-seq
OMalley et al.(2016)
NAP_col_v3a 		0.894 0.857
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr2.CM0641.320.nc NAC/NAM 10 134

Links

Other NAC/NAM family TFs
Other Lotus japonicus TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NAC029 Arabidopsis thaliana AT1G69490 D 0.894
Eucgr.B03208 Eucalyptus grandis Eucgr.B03208 I 0.894
Eucgr.G02486 Eucalyptus grandis Eucgr.G02486 I 0.899
Ciclev10032304m.g Citrus clementina Ciclev10032304m.g I 0.899
Carubv10020776m.g Capsella rubella Carubv10020776m.g I 0.894
Cagra.0887s0008 Capsella grandiflora Cagra.0887s0008 I 0.894
Bostr.10273s0418 Boechera stricta Bostr.10273s0418 I 0.894
Aquca_002_00663 Aquilegia coerulea Aquca_002_00663 I 0.878
mgf022118m Mimulus guttatus mgf022118m I 0.897
mgf016848m Mimulus guttatus mgf016848m I 0.881
Cucsa.284890 Cucumis sativus Cucsa.284890 I 0.890
cassava1317.valid.m1 Manihot esculenta cassava1317.valid.m1 I 0.891
29813.m001519 Ricinus communis 29813.m001519 I 0.896
Pm025312 Prunus mume Pm025312 I 0.905
Pm006470 Prunus mume Pm006470 I 0.898
Cla010367 Citrullus lanatus Cla010367 I 0.890
Ca_18090 Cicer arietinum Ca_18090 I 0.924
Ca_16379 Cicer arietinum Ca_16379 I 0.900
Lus10037156.g Linum usitatissimum Lus10037156.g I 0.892
PK25119.1 Cannabis sativa PK25119.1 I 0.903
Thhalv10018997m.g Eutrema salsugineum Thhalv10018997m.g I 0.894
SapurV1A.0801s0090 Salix purpurea SapurV1A.0801s0090 I 0.904
orange1.1g023197m.g Citrus sinensis orange1.1g023197m.g I 0.899
MDP0000481448 Malus domestica MDP0000481448 I 0.898
MDP0000404409 Malus domestica MDP0000404409 I 0.895
MDP0000262990 Malus domestica MDP0000262990 I 0.888
MDP0000180683 Malus domestica MDP0000180683 I 0.905
TCM_011671 Theobroma cacao TCM_011671 I 0.906
Lus10036773.g Linum usitatissimum Lus10036773.g I 0.898
Lus10036117.g Linum usitatissimum Lus10036117.g I 0.877
Lus10030446.g Linum usitatissimum Lus10030446.g I 0.926
Lus10026617.g Linum usitatissimum Lus10026617.g I 0.926
Gorai.008G179900 Gossypium raimondii Gorai.008G179900 I 0.902
Gorai.005G142300 Gossypium raimondii Gorai.005G142300 I 0.904
evm.TU.supercontig_1.48 Carica papaya evm.TU.supercontig_1.48 I 0.906
GLYMA01G06150 Glycine max GLYMA01G06150 I 0.918
OBART12G01290 Oryza barthii OBART12G01290 I 0.881
OBART11G01590 Oryza barthii OBART11G01590 I 0.881
MTR_5g041940 Medicago truncatula MTR_5g041940 I 0.931
MTR_4g081870 Medicago truncatula MTR_4g081870 I 0.902
GLYMA20G04400 Glycine max GLYMA20G04400 I 0.914
GLYMA16G26740 Glycine max GLYMA16G26740 I 0.881
GLYMA07G35630 Glycine max GLYMA07G35630 I 0.907
GLYMA02G12220 Glycine max GLYMA02G12220 I 0.913
OGLUM11G01310 Oryza glumaepatula OGLUM11G01310 I 0.881
NAP Arabidopsis lyrata fgenesh2_kg.2__1206__AT1G69490.1 I 0.894
Bra004385 Brassica rapa Bra004385 I 0.896
Bo6g108930 Brassica oleracea Bo6g108930 I 0.896
Bo6g095510 Brassica oleracea Bo6g095510 I 0.889
BGIOSGA036920 Oryza indica BGIOSGA036920 I 0.881
BGIOSGA036918 Oryza indica BGIOSGA036918 I 0.881
BGIOSGA034713 Oryza indica BGIOSGA034713 I 0.881
OS12G0123700 Oryza sativa OS12G0123700 I 0.881
Solyc05g007770.2 Solanum lycopersicum Solyc05g007770.2 I 0.876
Solyc04g005610.2 Solanum lycopersicum Solyc04g005610.2 I 0.901
Sb05g001580 Sorghum bicolor Sb05g001580 I 0.878
PRUPE_ppa009530mg Prunus persica PRUPE_ppa009530mg I 0.898
PRUPE_ppa007445mg Prunus persica PRUPE_ppa007445mg I 0.905
POPTR_0008s08850 Populus trichocarpa POPTR_0008s08850 I 0.900
PGSC0003DMG400018435 Solanum tuberosum PGSC0003DMG400018435 I 0.888
PGSC0003DMG400002824 Solanum tuberosum PGSC0003DMG400002824 I 0.903
NAP Vitis vinifera VIT_01s0026g02710 I 0.895
OS11G0126900 Oryza sativa OS11G0126900 I 0.881
ORGLA12G0011400 Oryza glaberrima ORGLA12G0011400 I 0.881
ONIVA11G01630 Oryza nivara ONIVA11G01630 I 0.881
OMERI12G00480 Oryza meridionalis OMERI12G00480 I 0.886
OLONG_026749 Oryza longistaminata OLONG_026749 I 0.881
OLONG_020632 Oryza longistaminata OLONG_020632 I 0.871
OGLUM12G01870 Oryza glumaepatula OGLUM12G01870 I 0.881