GH16373 (Drosophila grimshawi)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 FBgn0123844 T305359_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
eg
M03927_2.00 		Drosophila melanogaster
NAAAYTRGAKCA
TGMTCYARTTTN		 SELEX
Nitta et al.(2015)
eg_1 		0.991 1.000
eg
M06415_2.00 		Drosophila melanogaster
RAAANTAGRGCAV
BTGCYCTANTTTY		 B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560 		0.991 1.000
AGAP010438
M02389_2.00 		Anopheles gambiae
NRGDKCRNN
NNYGMHCYN		 PBM
Weirauch et al.(2014)
pTH6429 		0.969 0.843
knrl
M03930_2.00 		Drosophila melanogaster
AWNTRGRKCAN
NTGMYCYANWT		 SELEX
Nitta et al.(2015)
knrl_1 		0.965 0.829
knrl
M03931_2.00 		Drosophila melanogaster
AWBBGTAACR
YGTTACVVWT		 SELEX
Nitta et al.(2015)
knrl_2 		0.965 0.829
knrl
M06422_2.00 		Drosophila melanogaster
AAABTRGRKCA
TGMYCYAVTTT		 B1H
Zhu et al.(2011)
knrl_SANGER_5_FBgn0001323 		0.965 0.829
kni
M06557_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Mathelier et al.(2014)
MA0451.1 		0.958 0.800
kni
M06419_2.00 		Drosophila melanogaster
RAWNKVGNWC
GWNCBMNWTY		 B1H
Zhu et al.(2011)
kni_FlyReg_FBgn0001320 		0.958 0.800
kni
M06420_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Zhu et al.(2011)
kni_NAR_FBgn0001320 		0.958 0.800
kni
M06421_2.00 		Drosophila melanogaster
RWAANTRGRNCA
TGNYCYANTTWY		 B1H
Zhu et al.(2011)
kni_SANGER_5_FBgn0001320 		0.958 0.800
kni
M08225_2.00 		Drosophila melanogaster
YAGNGYTGYC
GRCARCNCTR		 ChIP-seq
Contrino et al.(2012)
Mf24 		0.958 0.800
kni
M09687_2.00 		Drosophila melanogaster
NAAWNKRGADCAV
BTGHTCYMNWTTN		 Misc
Kulakovskiy et al.(2009)
kni 		0.958 0.800
kni
M11189_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$KNI_Q6 		0.958 0.800
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0150279 Nuclear receptor 3 73

Links

Other Nuclear receptor family TFs
Other Drosophila grimshawi TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ato Drosophila melanogaster FBgn0010433 D
MDOA011891 Musca domestica MDOA011891 I
AGAP001741 Anopheles gambiae AGAP001741 I
ASTEI03140 Anopheles stephensi ASTEI03140 I
ASIS001094 Anopheles sinensis ASIS001094 I
AQUA000607 Anopheles quadriannulatus AQUA000607 I
AMIN003549 Anopheles minimus AMIN003549 I
AMEM005862 Anopheles merus AMEM005862 I
AMEC017901 Anopheles melas AMEC017901 I
AFUN009378 Anopheles funestus AFUN009378 I
AFAF015777 Anopheles farauti AFAF015777 I
AEPI001149 Anopheles epiroticus AEPI001149 I
ADIR010357 Anopheles dirus ADIR010357 I
ACUA024289 Anopheles culicifacies ACUA024289 I
ACOM034602 Anopheles coluzzii ACOM034602 I
ACHR008743 Anopheles christyi ACHR008743 I
AATE009125 Anopheles atroparvus AATE009125 I
AARA002190 Anopheles arabiensis AARA002190 I
LCUP004315 Lucilia cuprina LCUP004315 I
ato Drosophila virilis FBgn0261282 I
GE25860 Drosophila yakuba FBgn0242910 I
GK11390 Drosophila willistoni FBgn0213401 I
GD18530 Drosophila simulans FBgn0190053 I
GM23715 Drosophila sechellia FBgn0178580 I
GL23421 Drosophila persimilis FBgn0161011 I
GI24182 Drosophila mojavensis FBgn0146905 I
GH18671 Drosophila grimshawi FBgn0126138 I
GG24254 Drosophila erecta FBgn0116386 I
GF18335 Drosophila ananassae FBgn0095353 I
ato Drosophila pseudoobscura FBgn0080396 I