CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nhr-80
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00003670
T306193_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
H10E21.3a
Nuclear receptor
10
80
TRCLICSAQATGFHFEAQSCSACAAFFRRTVALTKSFKCITGRDDCNVHYSMHQICRSCRHKKCLSNGMKP
H10E21.3b
Nuclear receptor
28
98
TRCLICSAQATGFHFEAQSCSACAAFFRRTVALTKSFKCITGRDDCNVHYSMHQICRSCRHKKCLSNGMKP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG15730
Caenorhabditis briggsae
CBG15730
N
0.983
CBN19906
Caenorhabditis brenneri
CBN19906
N
0.982
CRE16168
Caenorhabditis remanei
CRE16168
N
0.979
ALUE_0000629201
Ascaris lumbricoides
ALUE_0000629201
N
0.934
ANCCAN_11786
Ancylostoma caninum
ANCCAN_11786
N
0.943
ANCCAN_12440
Ancylostoma caninum
ANCCAN_12440
N
0.943
ANCCEY_14894
Ancylostoma ceylanicum
ANCCEY_14894
N
0.918
ASU_00773
Ascaris suum
ASU_00773
N
0.934
EVEC_0000383901
Enterobius vermicularis
EVEC_0000383901
N
0.891
HCOI00823800
Haemonchus contortus
HCOI00823800
N
0.943
OESDEN_24381
Oesophagostomum dentatum
OESDEN_24381
N
0.943
scaffold1247-EXSNAP2012.3
Pristionchus exspectatus
scaffold1247-EXSNAP2012.3
N
0.944
SVUK_0000739401
Strongylus vulgaris
SVUK_0000739401
N
0.927
TELCIR_04754
Teladorsagia circumcincta
TELCIR_04754
N
0.943