CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVUK_0000739401
(
Strongylus vulgaris
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
SVUK_0000739401
T310695_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVUK_0000739401-mRNA-1
Nuclear receptor
22
92
HRCLVCGAQATGFHFDAQSCSACAAFFRRTVSLKKKFICIANRSDCQVHYTMHQICRACRFEKCLKAGMNR
Links
Other
Nuclear receptor
family TFs
Other
Strongylus vulgaris
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_12440
Ancylostoma caninum
ANCCAN_12440
N
0.979
ANCCAN_11786
Ancylostoma caninum
ANCCAN_11786
N
0.979
OESDEN_24381
Oesophagostomum dentatum
OESDEN_24381
N
0.979
TELCIR_04754
Teladorsagia circumcincta
TELCIR_04754
N
0.978
HCOI00823800
Haemonchus contortus
HCOI00823800
N
0.978
ANCCEY_14894
Ancylostoma ceylanicum
ANCCEY_14894
N
0.974
scaffold1247-EXSNAP2012.3
Pristionchus exspectatus
scaffold1247-EXSNAP2012.3
N
0.939
CRE16168
Caenorhabditis remanei
CRE16168
N
0.929
ASU_00773
Ascaris suum
ASU_00773
N
0.929
ALUE_0000629201
Ascaris lumbricoides
ALUE_0000629201
N
0.929
nhr-80
Caenorhabditis elegans
WBGene00003670
N
0.927
CBN19906
Caenorhabditis brenneri
CBN19906
N
0.924
CBG15730
Caenorhabditis briggsae
CBG15730
N
0.923
EVEC_0000383901
Enterobius vermicularis
EVEC_0000383901
N
0.828
L898_g29876
Steinernema monticolum
L898_g29876
N
0.792