CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ALUE_0000629201
(
Ascaris lumbricoides
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
ALUE_0000629201
T307943_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0000629201-mRNA-1
Nuclear receptor
4
74
YGCRICKAQATGFHFDAQSCSACAAFFRRTVALNRHFNCITGCNNCFVHYSVRQICRACRFRRCLEEGMKK
Links
Other
Nuclear receptor
family TFs
Other
Ascaris lumbricoides
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASU_00773
Ascaris suum
ASU_00773
N
0.984
CRE16168
Caenorhabditis remanei
CRE16168
N
0.941
CBN19906
Caenorhabditis brenneri
CBN19906
N
0.939
nhr-80
Caenorhabditis elegans
WBGene00003670
N
0.934
CBG15730
Caenorhabditis briggsae
CBG15730
N
0.933
SVUK_0000739401
Strongylus vulgaris
SVUK_0000739401
N
0.929
scaffold1247-EXSNAP2012.3
Pristionchus exspectatus
scaffold1247-EXSNAP2012.3
N
0.923
HCOI00823800
Haemonchus contortus
HCOI00823800
N
0.921
ANCCAN_11786
Ancylostoma caninum
ANCCAN_11786
N
0.920
ANCCAN_12440
Ancylostoma caninum
ANCCAN_12440
N
0.920
OESDEN_24381
Oesophagostomum dentatum
OESDEN_24381
N
0.920
TELCIR_04754
Teladorsagia circumcincta
TELCIR_04754
N
0.920
ANCCEY_14894
Ancylostoma ceylanicum
ANCCEY_14894
N
0.904
EVEC_0000383901
Enterobius vermicularis
EVEC_0000383901
N
0.889
BXY_1381300
Bursaphelenchus xylophilus
BXY_1381300
N
0.787
L898_g29876
Steinernema monticolum
L898_g29876
N
0.753