AMIN004996 (Anopheles minimus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 AMIN004996 T307704_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGAP010438
M02389_2.00 		Anopheles gambiae
NRGDKCRNN
NNYGMHCYN		 PBM
Weirauch et al.(2014)
pTH6429 		0.988 1.000
knrl
M03930_2.00 		Drosophila melanogaster
AWNTRGRKCAN
NTGMYCYANWT		 SELEX
Nitta et al.(2015)
knrl_1 		0.987 0.957
knrl
M03931_2.00 		Drosophila melanogaster
AWBBGTAACR
YGTTACVVWT		 SELEX
Nitta et al.(2015)
knrl_2 		0.987 0.957
knrl
M06422_2.00 		Drosophila melanogaster
AAABTRGRKCA
TGMYCYAVTTT		 B1H
Zhu et al.(2011)
knrl_SANGER_5_FBgn0001323 		0.987 0.957
kni
M06557_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Mathelier et al.(2014)
MA0451.1 		0.983 0.871
kni
M06419_2.00 		Drosophila melanogaster
RAWNKVGNWC
GWNCBMNWTY		 B1H
Zhu et al.(2011)
kni_FlyReg_FBgn0001320 		0.983 0.871
kni
M06420_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Zhu et al.(2011)
kni_NAR_FBgn0001320 		0.983 0.871
kni
M06421_2.00 		Drosophila melanogaster
RWAANTRGRNCA
TGNYCYANTTWY		 B1H
Zhu et al.(2011)
kni_SANGER_5_FBgn0001320 		0.983 0.871
kni
M08225_2.00 		Drosophila melanogaster
YAGNGYTGYC
GRCARCNCTR		 ChIP-seq
Contrino et al.(2012)
Mf24 		0.983 0.871
kni
M09687_2.00 		Drosophila melanogaster
NAAWNKRGADCAV
BTGHTCYMNWTTN		 Misc
Kulakovskiy et al.(2009)
kni 		0.983 0.871
kni
M11189_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$KNI_Q6 		0.983 0.871
eg
M03927_2.00 		Drosophila melanogaster
NAAAYTRGAKCA
TGMTCYARTTTN		 SELEX
Nitta et al.(2015)
eg_1 		0.969 0.843
eg
M06415_2.00 		Drosophila melanogaster
RAAANTAGRGCAV
BTGCYCTANTTTY		 B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560 		0.969 0.843
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AMIN004996-PA Nuclear receptor 3 73

Links

Other Nuclear receptor family TFs
Other Anopheles minimus TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene21669-v1.0-hybrid Fragaria vesca gene21669-v1.0-hybrid N
cassava38728.m1 Manihot esculenta cassava38728.m1 N
Cucsa.094440 Cucumis sativus Cucsa.094440 N
mgf020729m Mimulus guttatus mgf020729m N
Bostr.20903s0171 Boechera stricta Bostr.20903s0171 N
Cagra.5954s0021 Capsella grandiflora Cagra.5954s0021 N
Carubv10017836m.g Capsella rubella Carubv10017836m.g N
Ciclev10021841m.g Citrus clementina Ciclev10021841m.g N
evm.TU.supercontig_195.42 Carica papaya evm.TU.supercontig_195.42 N
gene21527-v1.0-hybrid Fragaria vesca gene21527-v1.0-hybrid N
cassava30288.valid.m1 Manihot esculenta cassava30288.valid.m1 N
Gorai.005G016700 Gossypium raimondii Gorai.005G016700 N
Gorai.005G126700 Gossypium raimondii Gorai.005G126700 N
MDP0000348552 Malus domestica MDP0000348552 N
MDP0000618200 Malus domestica MDP0000618200 N
orange1.1g025532m.g Citrus sinensis orange1.1g025532m.g N
SapurV1A.0834s0190 Salix purpurea SapurV1A.0834s0190 N
SapurV1A.1078s0040 Salix purpurea SapurV1A.1078s0040 N
Thhalv10006173m.g Eutrema salsugineum Thhalv10006173m.g N
PK13380.1 Cannabis sativa PK13380.1 N
POPTR_0007s01870 Populus trichocarpa POPTR_0007s01870 N
Bo6g076470 Brassica oleracea Bo6g076470 N
Bo8g093280 Brassica oleracea Bo8g093280 N
Bra003377 Brassica rapa Bra003377 N
GLYMA11G13610 Glycine max GLYMA11G13610 N
GLYMA12G05600 Glycine max GLYMA12G05600 N
GLYMA15G03440 Glycine max GLYMA15G03440 N
MTR_2g098920 Medicago truncatula MTR_2g098920 N
MTR_4g067290 Medicago truncatula MTR_4g067290 N
PGSC0003DMG402027016 Solanum tuberosum PGSC0003DMG402027016 N
AT3G59470 Arabidopsis thaliana AT3G59470 N
POPTR_0017s05780 Populus trichocarpa POPTR_0017s05780 N
PRUPE_ppa011567mg Prunus persica PRUPE_ppa011567mg N
scaffold_503155.1 Arabidopsis lyrata scaffold_503155.1 N
Solyc06g073200.2 Solanum lycopersicum Solyc06g073200.2 N
TCM_020020 Theobroma cacao TCM_020020 N
VIT_05s0102g00690 Vitis vinifera VIT_05s0102g00690 N
Ca_02686 Cicer arietinum Ca_02686 N
Cla010925 Citrullus lanatus Cla010925 N
27914.m000423 Ricinus communis 27914.m000423 N