HPBE_0000822201 (Heligmosomoides bakeri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 HPBE_0000822201 T308859_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
odr-7
M00697_2.00 		Caenorhabditis elegans
NDWTTGTAGNN
NNCTACAAWHN		 PBM
Narasimhan et al.(2015)
pTH9323 		0.953 0.783
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0000822201-mRNA-1 Nuclear receptor 40 113

Links

Other Nuclear receptor family TFs
Other Heligmosomoides bakeri TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
odr-7 Caenorhabditis elegans WBGene00003854 D 0.953
HPLM_0000729201 Haemonchus placei HPLM_0000729201 I 0.975
TCLT_0001044101 Thelazia callipaeda TCLT_0001044101 I 0.862
SVE_1772700 Strongyloides venezuelensis SVE_1772700 I 0.827
SSTP_0000225800 Strongyloides stercoralis SSTP_0000225800 I 0.802
SPAL_0001051900 Strongyloides papillosus SPAL_0001051900 I 0.802
SMUV_0000837101 Syphacia muris SMUV_0000837101 I 0.848
scaffold532-EXSNAP2012.4 Pristionchus exspectatus scaffold532-EXSNAP2012.4 I 0.907
OESDEN_00181 Oesophagostomum dentatum OESDEN_00181 I 0.954
nOo.2.0.1.g08993 Onchocerca ochengi nOo.2.0.1.g08993 I 0.885
nDi.2.2.2.g08322 Dirofilaria immitis nDi.2.2.2.g08322 I 0.878
L898_g1167 Steinernema monticolum L898_g1167 I 0.929
L893_g9511 Steinernema glaseri L893_g9511 I 0.929
L892_g8133 Steinernema scapterisci L892_g8133 I 0.929
L596_g18571 Steinernema carpocapsae L596_g18571 I 0.929
Bm3734 Brugia malayi Bm3734 I 0.885
DICVIV_10361 Dictyocaulus viviparus DICVIV_10361 I 0.972
BXY_0327500 Bursaphelenchus xylophilus BXY_0327500 I 0.936
ASU_07400 Ascaris suum ASU_07400 I 0.892
ANCCAN_08211 Ancylostoma caninum ANCCAN_08211 I 0.955
ALUE_0000980501 Ascaris lumbricoides ALUE_0000980501 I 0.892
ACOC_0001074701 Angiostrongylus costaricensis ACOC_0001074701 I 0.972
ACAC_0000449001 Angiostrongylus cantonensis ACAC_0000449001 I 0.972
WBGene00238790 Onchocerca volvulus WBGene00238790 I 0.885
LOAG_12992 Loa loa LOAG_12992 I 0.898
CRE14738 Caenorhabditis remanei CRE14738 I 0.953
CBG00123 Caenorhabditis briggsae CBG00123 I 0.941