nOo.2.0.1.g03859 (Onchocerca ochengi)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 nOo.2.0.1.g03859 T309858_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.918 0.600
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.812 0.500
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nOo.2.0.1.t03859-RA Nuclear receptor 66 135

Links

Other Nuclear receptor family TFs
Other Onchocerca ochengi TFs

227 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NAC69 Arabidopsis thaliana AT4G01550 D 0.000
Aquca_009_00966 Aquilegia coerulea Aquca_009_00966 I 0.000
POPTR_0014s07210 Populus trichocarpa POPTR_0014s07210 I 0.000
mgf022344m Mimulus guttatus mgf022344m I 0.000
Pm028711 Prunus mume Pm028711 I 0.000
Ca_20988 Cicer arietinum Ca_20988 I 0.000
TRIUR3_32613 Triticum urartu TRIUR3_32613 I 0.000
Traes_7DL_AB67A0B36 Triticum aestivum Traes_7DL_AB67A0B36 I 0.000
Traes_7BL_0C386426A Triticum aestivum Traes_7BL_0C386426A I 0.000
Traes_7AL_669D4AE47 Triticum aestivum Traes_7AL_669D4AE47 I 0.000
Si013369m.g Setaria italica Si013369m.g I 0.000
Sb07g003900 Sorghum bicolor Sb07g003900 I 0.000
PRUPE_ppb017658mg Prunus persica PRUPE_ppb017658mg I 0.000
POPTR_0014s10360 Populus trichocarpa POPTR_0014s10360 I 0.000
POPTR_0014s10350 Populus trichocarpa POPTR_0014s10350 I 0.000
POPTR_0014s10330 Populus trichocarpa POPTR_0014s10330 I 0.000
Thhalv10007665m.g Eutrema salsugineum Thhalv10007665m.g I 0.000
Bostr.10064s0010 Boechera stricta Bostr.10064s0010 I 0.000
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I 0.000
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.000
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I 0.000
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I 0.000
Cagra.1968s0045 Capsella grandiflora Cagra.1968s0045 I 0.000
Carubv10009049m.g Capsella rubella Carubv10009049m.g I 0.000
Carubv10009451m.g Capsella rubella Carubv10009451m.g I 0.000
Pavir.Fa01901 Panicum virgatum Pavir.Fa01901 I 0.000
Pavir.Fb00405 Panicum virgatum Pavir.Fb00405 I 0.000
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I 0.000
SapurV1A.0321s0340 Salix purpurea SapurV1A.0321s0340 I 0.000
SapurV1A.0321s0350 Salix purpurea SapurV1A.0321s0350 I 0.000
SapurV1A.0321s0360 Salix purpurea SapurV1A.0321s0360 I 0.000
SapurV1A.0586s0170 Salix purpurea SapurV1A.0586s0170 I 0.000
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I 0.000
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I 0.000
BGIOSGA027623 Oryza indica BGIOSGA027623 I 0.000
Bo5g002810 Brassica oleracea Bo5g002810 I 0.000
Bo5g002850 Brassica oleracea Bo5g002850 I 0.000
Bo6g119080 Brassica oleracea Bo6g119080 I 0.000
Bo9g004070 Brassica oleracea Bo9g004070 I 0.000
Bo9g004090 Brassica oleracea Bo9g004090 I 0.000
Bra033296 Brassica rapa Bra033296 I 0.000
Bra036328 Brassica rapa Bra036328 I 0.000
BRADI3G16480 Brachypodium distachyon BRADI3G16480 I 0.000
F775_30082 Aegilops tauschii F775_30082 I 0.000
ANAC001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000119 I 0.000
fgenesh1_pg.C_scaffold_3000386 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000386 I 0.000
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.000
GSMUA_AchrUn_randomG04060_001 Musa acuminata GSMUA_AchrUn_randomG04060_001 I 0.000
OMERI08G03500 Oryza meridionalis OMERI08G03500 I 0.000
POPTR_0002s18310 Populus trichocarpa POPTR_0002s18310 I 0.000
OS08G0157900 Oryza sativa OS08G0157900 I 0.000
ORUFI08G03870 Oryza rufipogon ORUFI08G03870 I 0.000
ORGLA08G0029000 Oryza glaberrima ORGLA08G0029000 I 0.000
OPUNC08G03310 Oryza punctata OPUNC08G03310 I 0.000
ONIVA08G03440 Oryza nivara ONIVA08G03440 I 0.000
LPERR08G03510 Leersia perrieri LPERR08G03510 I 0.000
OLONG_000105 Oryza longistaminata OLONG_000105 I 0.000
OGLUM08G03540 Oryza glumaepatula OGLUM08G03540 I 0.000
OBART08G03460 Oryza barthii OBART08G03460 I 0.000
OB08G13730 Oryza brachyantha OB08G13730 I 0.000
MTR_8g023840 Medicago truncatula MTR_8g023840 I 0.000
MLOC_50406 Hordeum vulgare MLOC_50406 I 0.000
Bostr.5325s0010 Boechera stricta Bostr.5325s0010 N 0.000
Bo5g002860 Brassica oleracea Bo5g002860 N 0.000
Bo5g002830 Brassica oleracea Bo5g002830 N 0.000
Bostr.15697s0466 Boechera stricta Bostr.15697s0466 N 0.000