SMUV_0000721901 (Syphacia muris)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SMUV_0000721901 T310421_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-122
M00696_2.00 		Caenorhabditis elegans
NDTGGAGTVN
NBACTCCAHN		 PBM
Narasimhan et al.(2015)
pTH9326 		0.779 0.471
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000721901-mRNA-1 Nuclear receptor 5 74

Links

Other Nuclear receptor family TFs
Other Syphacia muris TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-122 Caenorhabditis elegans WBGene00003712 D 0.779
CBG20699 Caenorhabditis briggsae CBG20699 I 0.766
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.765
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.794
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.767
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.794
MhA1_Contig1462.frz3.gene15 Meloidogyne hapla MhA1_Contig1462.frz3.gene15 I 0.804
L898_g9580 Steinernema monticolum L898_g9580 I 0.748
L893_g18997 Steinernema glaseri L893_g18997 I 0.761
L892_g2782 Steinernema scapterisci L892_g2782 I 0.853
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.832
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.811
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.811
BXY_1189000 Bursaphelenchus xylophilus BXY_1189000 I 0.745
BXY_0327500 Bursaphelenchus xylophilus BXY_0327500 I 0.765
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.811
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.790
PPA29361 Pristionchus pacificus PPA29361 I 0.801
CBG13574 Caenorhabditis briggsae CBG13574 I 0.796
EVEC_0000891501 Enterobius vermicularis EVEC_0000891501 N 0.817
BXY_1188800 Bursaphelenchus xylophilus BXY_1188800 N 0.776
L596_g24910 Steinernema carpocapsae L596_g24910 N 0.788
L889_g16048 Steinernema feltiae L889_g16048 N 0.781
BXY_1188600 Bursaphelenchus xylophilus BXY_1188600 N 0.765
L892_g8146 Steinernema scapterisci L892_g8146 N 0.791
BXY_0200500 Bursaphelenchus xylophilus BXY_0200500 N 0.828
ASIM_0000109601 Anisakis simplex ASIM_0000109601 N 0.748
TCNE_0001892601 Toxocara canis TCNE_0001892601 N 0.757