CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0000977701
(
Syphacia muris
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
SMUV_0000977701
T310431_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0000977701-mRNA-1
Nuclear receptor
12
75
VPCQICGDRSYGKHYGLWTCDGCSCFFKRRYLTAGDNNCPVDKTRRNWCPACRLRKCYQMNMNP
Links
Other
Nuclear receptor
family TFs
Other
Syphacia muris
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CapteG177303
Capitella teleta
CapteG177303
I
0.834
RSKR_0000433000
Rhabditophanes kr3021
RSKR_0000433000
I
0.942
L889_g32531
Steinernema feltiae
L889_g32531
I
0.962
HPLM_0002159101
Haemonchus placei
HPLM_0002159101
I
0.975
ACOC_0001282001
Angiostrongylus costaricensis
ACOC_0001282001
I
0.955
ACAC_0001082701
Angiostrongylus cantonensis
ACAC_0001082701
I
0.955
Sakowv30002570m.g
Saccoglossus kowalevskii
Sakowv30002570m.g
I
0.924
Ocbimv22005486m.g
Octopus bimaculoides
Ocbimv22005486m.g
I
0.902
Hsal_03084--XP_001121181.1_APIME
Harpegnathos saltator
Hsal_03084--XP_001121181.1_APIME
I
0.847
nhr-239
Caenorhabditis elegans
WBGene00021848
I
0.916
tetur01g07700
Tetranychus urticae
tetur01g07700
I
0.936
TC010460
Tribolium castaneum
TC010460
I
0.850
SMAR006023
Strigamia maritima
SMAR006023
I
0.938
ACYPI48102
Acyrthosiphon pisum
ACYPI48102
I
0.887
CBG09846
Caenorhabditis briggsae
CBG09846
I
0.959
CBN10661
Caenorhabditis brenneri
CBN10661
I
0.928
CRE25188
Caenorhabditis remanei
CRE25188
I
0.962
HelroG148423
Helobdella robusta
HelroG148423
I
0.959
ISCW008659
Ixodes scapularis
ISCW008659
I
0.926
L798_08383
Zootermopsis nevadensis
L798_08383
I
0.825
LotgiG132791
Lottia gigantea
LotgiG132791
I
0.958
NV10871
Nasonia vitripennis
NV10871
I
0.929
SPU_012586
Strongylocentrotus purpuratus
SPU_012586
I
0.964
BXY_1663900
Bursaphelenchus xylophilus
BXY_1663900
N
0.944
L596_g19535
Steinernema carpocapsae
L596_g19535
N
0.964
L892_g29081
Steinernema scapterisci
L892_g29081
N
0.964
PTRK_0000986400
Parastrongyloides trichosuri
PTRK_0000986400
N
0.927
SPAL_0001030000
Strongyloides papillosus
SPAL_0001030000
N
0.927
SSTP_0000371600
Strongyloides stercoralis
SSTP_0000371600
N
0.927
SVE_0494600
Strongyloides venezuelensis
SVE_0494600
N
0.906