nhr-239 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00021848 T306382_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hr83
M06434_2.00 		Drosophila melanogaster
RAAGTCANHVWVGM
KCBWBDNTGACTTY		 B1H
Zhu et al.(2011)
Hr83_SANGER_5_FBgn0037436 		0.765 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Y54F10AM.1 Nuclear receptor 9 79

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN10661 Caenorhabditis brenneri CBN10661 I 0.994
CBG09846 Caenorhabditis briggsae CBG09846 I 0.990
CRE25188 Caenorhabditis remanei CRE25188 I 0.989
Ocbimv22005486m.g Octopus bimaculoides Ocbimv22005486m.g I 0.983
ACAC_0001082701 Angiostrongylus cantonensis ACAC_0001082701 I 0.980
ACOC_0001282001 Angiostrongylus costaricensis ACOC_0001282001 I 0.980
L892_g29081 Steinernema scapterisci L892_g29081 N 0.978
L889_g32531 Steinernema feltiae L889_g32531 I 0.978
L596_g19535 Steinernema carpocapsae L596_g19535 N 0.978
tetur01g07700 Tetranychus urticae tetur01g07700 I 0.968
HPLM_0002159101 Haemonchus placei HPLM_0002159101 I 0.968
ISCW008659 Ixodes scapularis ISCW008659 I 0.966
LotgiG132791 Lottia gigantea LotgiG132791 I 0.965
Sakowv30002570m.g Saccoglossus kowalevskii Sakowv30002570m.g I 0.964
SMAR006023 Strigamia maritima SMAR006023 I 0.962
NV10871 Nasonia vitripennis NV10871 I 0.961
SPU_012586 Strongylocentrotus purpuratus SPU_012586 I 0.960
BXY_1663900 Bursaphelenchus xylophilus BXY_1663900 N 0.955
PTRK_0000986400 Parastrongyloides trichosuri PTRK_0000986400 N 0.948
SPAL_0001030000 Strongyloides papillosus SPAL_0001030000 N 0.948
ACYPI48102 Acyrthosiphon pisum ACYPI48102 I 0.948
SSTP_0000371600 Strongyloides stercoralis SSTP_0000371600 N 0.948
HelroG148423 Helobdella robusta HelroG148423 I 0.940
L798_08383 Zootermopsis nevadensis L798_08383 I 0.934
SVE_0494600 Strongyloides venezuelensis SVE_0494600 N 0.933
TC010460 Tribolium castaneum TC010460 I 0.927
CapteG177303 Capitella teleta CapteG177303 I 0.927
RSKR_0000433000 Rhabditophanes kr3021 RSKR_0000433000 I 0.922
SMUV_0000977701 Syphacia muris SMUV_0000977701 N 0.916
Hsal_03084--XP_001121181.1_APIME Harpegnathos saltator Hsal_03084--XP_001121181.1_APIME I 0.888
GE10213 Drosophila yakuba FBgn0228087 I 0.768
GD19868 Drosophila simulans FBgn0191357 I 0.765
GM10889 Drosophila sechellia FBgn0165835 I 0.765
GG13368 Drosophila erecta FBgn0105640 I 0.765
Hr83 Drosophila melanogaster FBgn0037436 D 0.765
ASTEI03427 Anopheles stephensi ASTEI03427 I 0.763
AMAM005986 Anopheles maculatus AMAM005986 I 0.763
GF16659 Drosophila ananassae FBgn0093680 I 0.760
AATE004130 Anopheles atroparvus AATE004130 I 0.760
AALB009657 Anopheles albimanus AALB009657 I 0.758
AMIN000835 Anopheles minimus AMIN000835 I 0.756
CpipJ_CPIJ015933 Culex pipiens CpipJ_CPIJ015933 I 0.756
CPIJ015933 Culex quinquefasciatus CPIJ015933 I 0.756
AFUN005541 Anopheles funestus AFUN005541 I 0.755
AEPI004731 Anopheles epiroticus AEPI004731 I 0.755
AGAP002234 Anopheles gambiae AGAP002234 I 0.755
AMEM012481 Anopheles merus AMEM012481 I 0.755
AQUA004261 Anopheles quadriannulatus AQUA004261 I 0.755
AARA006703 Anopheles arabiensis AARA006703 I 0.755
GI24589 Drosophila mojavensis FBgn0147311 I 0.754
AMEC011506 Anopheles melas AMEC011506 I 0.752
HR83 Aedes aegypti AAEL007350 I 0.749