CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000013302
(
Pelodiscus sinensis
)
p53
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00870 (P53)
IPR011615
ENSPSIG00000013302
T311132_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TP53
M09337_2.00
Homo sapiens
DRRCWTGYYCAGRCATGYYY
RRRCATGYCTGRRCAWGYYH
Misc
Kulakovskiy et al.(2013)
P53_HUMAN.H11MO.0.A
0.714
0.714
TP53
M09621_2.00
Homo sapiens
NNDRCAWGYHNNDRCWWGYH
DRCWWGYHNNDRCWTGYHNN
Misc
Heinz et al.(2010)
Saos-p53
0.714
0.714
TP53
M11197_2.00
Homo sapiens
RGACATGCCCGGGCATGTYC
GRACATGCCCGGGCATGTCY
Transfac
Matys et al.(2006)
V$P53_01
0.714
0.714
TP53
M11198_2.00
Homo sapiens
NGRCWTGYYY
RRRCAWGYCN
Transfac
Matys et al.(2006)
V$P53_02
0.714
0.714
TP53
M11199_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_03
0.714
0.714
TP53
M11200_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_04
0.714
0.714
TP53
M11201_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_05
0.714
0.714
TP53
M11202_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_Q3_01
0.714
0.714
TP53
M11203_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_Q3
0.714
0.714
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000014905
p53
82
277
STVPSTEDYAGEHDFQLAFQQSGTAKSVTCTYSPDLNKLFCQLAKTCPVQIKVSSQPPPGSVIRATAVYKKSEHVAEVVRRCPHHERSADYSDGVAPAQHLIRIEGNHQAYYRDDENTKRQSVTVPYETPQVGSDCITVLYNFMCNSSCMGGMNRRPILAIITLESKNGQLLGRRCFEVRVCACPGRDRRTEEENH
Links
Other
p53
family TFs
Other
Pelodiscus sinensis
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TP53
Homo sapiens
ENSG00000141510
D
0.732
LOC100910954
Rattus norvegicus
ENSRNOG00000046657
I
0.726
ENSOARG00000015571
Ovis aries
ENSOARG00000015571
I
0.730
ENSOCUG00000001138
Oryctolagus cuniculus
ENSOCUG00000001138
I
0.735
TP53
Otolemur garnettii
ENSOGAG00000016871
I
0.718
TP53
Ochotona princeps
ENSOPRG00000006441
I
0.722
ENSPANG00000024061
Papio anubis
ENSPANG00000024061
I
0.724
TP53
Procavia capensis
ENSPCAG00000012725
I
0.704
ENSPPYG00000007934
Pongo abelii
ENSPPYG00000007934
I
0.714
TP53
Pan troglodytes
ENSPTRG00000008703
I
0.714
Tp53
Rattus norvegicus
ENSRNOG00000010756
I
0.708
ENSAMEG00000016851
Ailuropoda melanoleuca
ENSAMEG00000016851
I
0.730
TP53
Sorex araneus
ENSSARG00000006206
I
0.709
ENSSHAG00000015510
Sarcophilus harrisii
ENSSHAG00000015510
I
0.730
TP53
Sus scrofa
ENSSSCG00000017950
I
0.755
ENSSTOG00000022774
Ictidomys tridecemlineatus
ENSSTOG00000022774
I
0.724
TP53
Tursiops truncatus
ENSTTRG00000010250
I
0.745
Cmyd_10000491
Chelonia mydas
Cmyd_10000491
I
0.903
ENSBTAP00000001420-D1
Bos grunniens
ENSBTAP00000001420-D1
I
0.730
ENSP00000269305
Macaca fascicularis
ENSP00000269305
I
0.724
Myotis_brandtii_TP53_10021059
Myotis brandtii
Myotis_brandtii_TP53_10021059
I
0.724
ENSMPUG00000009017
Mustela putorius furo
ENSMPUG00000009017
I
0.730
ENSACAG00000022533
Anolis carolinensis
ENSACAG00000022533
I
0.800
TP53
Bos taurus
ENSBTAG00000001069
I
0.735
TP53
Canis familiaris
ENSCAFG00000016714
I
0.719
TP53
Callithrix jacchus
ENSCJAG00000014978
I
0.713
TP53
Cavia porcellus
ENSCPOG00000014252
I
0.723
ENSCSAG00000011345
Chlorocebus sabaeus
ENSCSAG00000011345
I
0.724
tp53
Danio rerio
ENSDARG00000035559
I
0.754
TP53
Dasypus novemcinctus
ENSDNOG00000005252
I
0.724
TP53
Erinaceus europaeus
ENSEEUG00000014573
I
0.740
TP53
Felis catus
ENSFCAG00000009623
I
0.740
TP53
Gorilla gorilla
ENSGGOG00000009786
I
0.718
ENSMEUG00000013135
Macropus eugenii
ENSMEUG00000013135
I
0.719
TP53
Microcebus murinus
ENSMICG00000014853
I
0.718
ENSMLUG00000006411
Myotis lucifugus
ENSMLUG00000006411
I
0.724
TP53
Macaca mulatta
ENSMMUG00000008639
I
0.724
ENSLACG00000014014
Latimeria chalumnae
ENSLACG00000014014
N
0.786
ENSLOCG00000013832
Lepisosteus oculatus
ENSLOCG00000013832
N
0.786
Alligator_sinensis_CCG007355.2
Alligator sinensis
Alligator_sinensis_CCG007355.2
N
0.801
ENSOANG00000011981
Ornithorhynchus anatinus
ENSOANG00000011981
N
0.732
Pvit_02042
Pogona vitticeps
Pvit_02042
N
0.740
tp53
Xenopus tropicalis
XB-GENE-484286
N
0.745
tp53.L
Xenopus laevis
XB-GENE-6252168
N
0.740