LOC100910954 (Rattus norvegicus)
p53

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00870 (P53) IPR011615 ENSRNOG00000046657 T311144_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TP53
M09337_2.00 		Homo sapiens
DRRCWTGYYCAGRCATGYYY
RRRCATGYCTGRRCAWGYYH		 Misc
Kulakovskiy et al.(2013)
P53_HUMAN.H11MO.0.A 		0.978 0.978
TP53
M09621_2.00 		Homo sapiens
NNDRCAWGYHNNDRCWWGYH
DRCWWGYHNNDRCWTGYHNN		 Misc
Heinz et al.(2010)
Saos-p53 		0.978 0.978
TP53
M11197_2.00 		Homo sapiens
RGACATGCCCGGGCATGTYC
GRACATGCCCGGGCATGTCY		 Transfac
Matys et al.(2006)
V$P53_01 		0.978 0.978
TP53
M11198_2.00 		Homo sapiens
NGRCWTGYYY
RRRCAWGYCN		 Transfac
Matys et al.(2006)
V$P53_02 		0.978 0.978
TP53
M11199_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_03 		0.978 0.978
TP53
M11200_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_04 		0.978 0.978
TP53
M11201_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_05 		0.978 0.978
TP53
M11202_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_Q3_01 		0.978 0.978
TP53
M11203_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_Q3 		0.978 0.978
Trp53
M03439_2.00 		Mus musculus
ACWTGYYNHHDSACWTGT
ACAWGTSHDDNRRCAWGT		 SELEX
Jolma et al.(2013)
Tp53_1 		0.866 0.866
Trp53
M03440_2.00 		Mus musculus
ACWTGTYHNNGACWTGT
ACAWGTCNNDRACAWGT		 SELEX
Jolma et al.(2013)
Tp53_2 		0.866 0.866
Trp53
M03441_2.00 		Mus musculus
RACATGYCYRGRCATGTY
RACATGYCYRGRCATGTY		 SELEX
Jolma et al.(2013)
Tp53_3 		0.866 0.866
Trp53
M09340_2.00 		Mus musculus
RRRCAWGYCCRGRCADGYMH
DKRCHTGYCYGGRCWTGYYY		 Misc
Kulakovskiy et al.(2013)
P53_MOUSE.H11MO.0.A 		0.866 0.866
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000064177 p53 1 179

Links

Other p53 family TFs
Other Rattus norvegicus TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Trp53 Mus musculus ENSMUSG00000059552 D 0.866
TP53 Homo sapiens ENSG00000141510 D 1.000
TP53 Pan troglodytes ENSPTRG00000008703 I 0.978
ENSOARG00000015571 Ovis aries ENSOARG00000015571 I 0.883
ENSOCUG00000001138 Oryctolagus cuniculus ENSOCUG00000001138 I 0.944
ENSOCUG00000022109 Oryctolagus cuniculus ENSOCUG00000022109 I 0.799
TP53 Otolemur garnettii ENSOGAG00000016871 I 0.856
TP53 Ochotona princeps ENSOPRG00000006441 I 0.894
ENSPANG00000024061 Papio anubis ENSPANG00000024061 I 0.955
TP53 Procavia capensis ENSPCAG00000012725 I 0.844
ENSPPYG00000007934 Pongo abelii ENSPPYG00000007934 I 0.972
ENSPSIG00000013302 Pelodiscus sinensis ENSPSIG00000013302 I 0.726
Myotis_brandtii_TP53_10021059 Myotis brandtii Myotis_brandtii_TP53_10021059 I 0.866
Tp53 Rattus norvegicus ENSRNOG00000010756 I 0.888
TP53 Sorex araneus ENSSARG00000006206 I 0.855
ENSSHAG00000015510 Sarcophilus harrisii ENSSHAG00000015510 I 0.821
TP53 Sus scrofa ENSSSCG00000017950 I 0.916
ENSSTOG00000022774 Ictidomys tridecemlineatus ENSSTOG00000022774 I 0.939
TP53 Tursiops truncatus ENSTTRG00000010250 I 0.905
Cmyd_10000491 Chelonia mydas Cmyd_10000491 I 0.726
ENSBTAP00000001420-D1 Bos grunniens ENSBTAP00000001420-D1 I 0.899
ENSP00000269305 Macaca fascicularis ENSP00000269305 I 0.955
ENSAMEG00000016851 Ailuropoda melanoleuca ENSAMEG00000016851 I 0.888
TP53 Felis catus ENSFCAG00000009623 I 0.877
TP53 Bos taurus ENSBTAG00000001069 I 0.816
TP53 Canis familiaris ENSCAFG00000016714 I 0.888
TP53 Callithrix jacchus ENSCJAG00000014978 I 0.877
TP53 Cavia porcellus ENSCPOG00000014252 I 0.894
ENSCSAG00000011345 Chlorocebus sabaeus ENSCSAG00000011345 I 0.955
tp53 Danio rerio ENSDARG00000035559 I 0.710
TP53 Dasypus novemcinctus ENSDNOG00000005252 I 0.860
TP53 Equus caballus ENSECAG00000008126 I 0.855
TP53 Erinaceus europaeus ENSEEUG00000014573 I 0.827
ENSETEG00000008987 Echinops telfairi ENSETEG00000008987 I 0.742
ENSNLEG00000009730 Nomascus leucogenys ENSNLEG00000009730 I 0.933
TP53 Gorilla gorilla ENSGGOG00000009786 I 0.972
ENSLAFG00000007483 Loxodonta africana ENSLAFG00000007483 I 0.760
ENSMEUG00000013135 Macropus eugenii ENSMEUG00000013135 I 0.827
TP53 Microcebus murinus ENSMICG00000014853 I 0.927
ENSMLUG00000006411 Myotis lucifugus ENSMLUG00000006411 I 0.866
ENSMLUG00000025140 Myotis lucifugus ENSMLUG00000025140 I 0.765
TP53 Macaca mulatta ENSMMUG00000008639 I 0.955
ENSMPUG00000009017 Mustela putorius furo ENSMPUG00000009017 I 0.883
ENSLACG00000014014 Latimeria chalumnae ENSLACG00000014014 N 0.710