CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OFLC_0000380401
(
Onchocerca flexuosa
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
OFLC_0000380401
T312870_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PAX7
M00346_2.00
Homo sapiens
NGTYAYGSHN
NDSCRTRACN
PBM
Barrera et al.(2016)
PAX7_REF
0.791
0.791
PAX7
M00345_2.00
Homo sapiens
NSGTCACGSN
NSCGTGACSN
PBM
Barrera et al.(2016)
PAX7_P112L
0.791
0.791
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OFLC_0000380401-mRNA-1
Paired box
2
68
GQGRINQLGGVFINGRPLPQHIRIKIIEMASNGIKPCHISRQLRVSHGAVSKILNRYVETGSVSPGQ
Links
Other
Paired box
family TFs
Other
Onchocerca flexuosa
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PAX7
Homo sapiens
ENSG00000009709
D
0.791
Alligator_sinensis_CCG006492.1
Alligator sinensis
Alligator_sinensis_CCG006492.1
I
0.791
HPBE_0000479901
Heligmosomoides bakeri
HPBE_0000479901
I
0.701
HPLM_0000491501
Haemonchus placei
HPLM_0000491501
I
0.701
HCOI01205400
Haemonchus contortus
HCOI01205400
I
0.701
DICVIV_04707
Dictyocaulus viviparus
DICVIV_04707
I
0.701
NECAME_04629
Necator americanus
NECAME_04629
I
0.701
PEQ_0000701201
Parascaris equorum
PEQ_0000701201
I
0.761
ALUE_0001653201
Ascaris lumbricoides
ALUE_0001653201
I
0.866
ALUE_0000098101
Ascaris lumbricoides
ALUE_0000098101
I
0.866
AMAM016481
Anopheles maculatus
AMAM016481
I
0.701
AFUN002668
Anopheles funestus
AFUN002668
I
0.791
LCUP011796
Lucilia cuprina
LCUP011796
I
0.776
Cflo_06473--XP_394848.3_APIME
Camponotus floridanus
Cflo_06473--XP_394848.3_APIME
I
0.791
SMAR015380
Strigamia maritima
SMAR015380
I
0.791
SINV15897
Solenopsis invicta
SINV15897
I
0.791
ISCW003096
Ixodes scapularis
ISCW003096
I
0.791
TELCIR_10899
Teladorsagia circumcincta
TELCIR_10899
I
0.701
DAPPUDRAFT_65647
Daphnia pulex
DAPPUDRAFT_65647
I
0.776
DAPPUDRAFT_7942
Daphnia pulex
DAPPUDRAFT_7942
I
0.761
pax1b
Danio rerio
ENSDARG00000073814
I
0.701
Pax7
Dipodomys ordii
ENSDORG00000011854
I
0.791
ENSGMOG00000003366
Gadus morhua
ENSGMOG00000003366
I
0.791
ENSMODG00000025571
Monodelphis domestica
ENSMODG00000025571
I
0.791
ENSORLG00000019389
Oryzias latipes
ENSORLG00000019389
I
0.776
PAX7
Procavia capensis
ENSPCAG00000005303
I
0.791
ENSPMAG00000010414
Petromyzon marinus
ENSPMAG00000010414
I
0.701
ENSTNIG00000005618
Tetraodon nigroviridis
ENSTNIG00000005618
I
0.791
ENSTRUG00000007849
Takifugu rubripes
ENSTRUG00000007849
I
0.791
GL14130
Drosophila persimilis
FBgn0151735
I
0.791
scaffold324-EXSNAP2012.27
Pristionchus exspectatus
scaffold324-EXSNAP2012.27
N
0.806
nOo.2.0.1.g04237
Onchocerca ochengi
nOo.2.0.1.g04237
N
0.985
nLs.2.1.2.g02363
Litomosoides sigmodontis
nLs.2.1.2.g02363
N
1.000
ANCCEY_09890
Ancylostoma ceylanicum
ANCCEY_09890
N
0.866
TASK_0000366101
Taenia asiatica
TASK_0000366101
N
0.716
NBR_0001663601
Nippostrongylus brasiliensis
NBR_0001663601
N
0.851
nAv.1.0.1.g09239
Acanthocheilonema viteae
nAv.1.0.1.g09239
N
0.970
MhA1_Contig2347.frz3.gene2
Meloidogyne hapla
MhA1_Contig2347.frz3.gene2
N
0.761
MCOS_0000760501
Mesocestoides corti
MCOS_0000760501
N
0.716
TCLT_0000479701
Thelazia callipaeda
TCLT_0000479701
N
0.955
TsM_000871200
Taenia solium
TsM_000871200
N
0.716
HNAJ_0000415201
Hymenolepis nana
HNAJ_0000415201
N
0.716
HDID_0000423901
Hymenolepis diminuta
HDID_0000423901
N
0.716
Hba_09392
Heterorhabditis bacteriophora
Hba_09392
N
0.896
EVEC_0000839201
Enterobius vermicularis
EVEC_0000839201
N
0.881
EmuJ_001189700
Echinococcus multilocularis
EmuJ_001189700
N
0.716
EEL_0000119101
Elaeophora elaphi
EEL_0000119101
N
0.970
DICVIV_03564
Dictyocaulus viviparus
DICVIV_03564
N
0.881
D915_03045
Fasciola hepatica
D915_03045
N
0.716
BTMF_0001220301
Brugia timori
BTMF_0001220301
N
1.000
augustus_masked-nMf.1.1.scaf05526-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf05526-processed-gene-0.0
N
0.761
A_01307
Schistosoma haematobium
A_01307
N
0.716
WBGene00247363
Onchocerca volvulus
WBGene00247363
N
0.985
LOAG_04282
Loa loa
LOAG_04282
N
1.000
CJA02385
Caenorhabditis japonica
CJA02385
N
0.851
WUBG_03652
Wuchereria bancrofti
WUBG_03652
N
0.970