BTMF_0000266401 (Brugia timori)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 BTMF_0000266401 T315006_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Minc10479
M02439_2.00 		Meloidogyne incognita
NCCSAAWTTN
NAAWTTSGGN		 PBM
Weirauch et al.(2014)
pTH9213 		0.795 0.795
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BTMF_0000266401-mRNA-1 Pipsqueak 110 154

Links

Other Pipsqueak family TFs
Other Brugia timori TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F443_21694 Phytophthora parasitica F443_21694 N
fgenesh_scip_prom.28083.4621 Phytophthora lateralis fgenesh_scip_prom.28083.4621 N
fgenesh_scip_prom.46568.8623 Phytophthora kernoviae fgenesh_scip_prom.46568.8623 N
maker-pir_contig_57-snap-gene-0.21 Pythium irregulare maker-pir_contig_57-snap-gene-0.21 N
maker-piw_contig_2-fgenesh-gene-0.31 Pythium iwayamai maker-piw_contig_2-fgenesh-gene-0.31 N
Phyra79678 Phytophthora ramorum Phyra79678 N
PITG_08770 Phytophthora infestans PITG_08770 N
PYU1_G000053 Pythium ultimum PYU1_G000053 N