Carubv10024278m.g (Capsella rubella)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Carubv10024278m.g T315994_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10024278m PLATZ 60 140

Links

Other PLATZ family TFs
Other Capsella rubella TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0001_3341 Arabidopsis lyrata Al_scaffold_0001_3341 N 0.722
AMTR_s00008p00208550 Amborella trichopoda AMTR_s00008p00208550 N 0.708
AT1G32700 Arabidopsis thaliana AT1G32700 N 0.722
AT2G27930 Arabidopsis thaliana AT2G27930 N 0.975
BGIOSGA005806 Oryza indica BGIOSGA005806 N 0.736
BGIOSGA014451 Oryza indica BGIOSGA014451 N 0.736
Bo4g073120 Brassica oleracea Bo4g073120 N 0.889
Bo4g164920 Brassica oleracea Bo4g164920 N 0.901
Bo5g049240 Brassica oleracea Bo5g049240 N 0.722
Bo8g028900 Brassica oleracea Bo8g028900 N 0.708
Bo8g070540 Brassica oleracea Bo8g070540 N 0.722
Bra011992 Brassica rapa Bra011992 N 0.889
Bra023280 Brassica rapa Bra023280 N 0.722
Bra034379 Brassica rapa Bra034379 N 0.926
Bra035494 Brassica rapa Bra035494 N 0.708
BRADI3G43000 Brachypodium distachyon BRADI3G43000 N 0.709
BRADI3G52170 Brachypodium distachyon BRADI3G52170 N 0.736
F775_22386 Aegilops tauschii F775_22386 N 0.709
F775_28196 Aegilops tauschii F775_28196 N 0.722
GLYMA01G02180 Glycine max GLYMA01G02180 N 0.736
GLYMA01G11390 Glycine max GLYMA01G11390 N 0.708
GLYMA03G34530 Glycine max GLYMA03G34530 N 0.778
GLYMA08G36641 Glycine max GLYMA08G36641 N 0.722
GLYMA09G33770 Glycine max GLYMA09G33770 N 0.750
GLYMA10G07240 Glycine max GLYMA10G07240 N 0.792
GLYMA12G08810 Glycine max GLYMA12G08810 N 0.700
GLYMA13G21140 Glycine max GLYMA13G21140 N 0.778
GLYMA19G37220 Glycine max GLYMA19G37220 N 0.792
GRMZM2G004548 Zea mays GRMZM2G004548 N 0.736
GRMZM2G086403 Zea mays GRMZM2G086403 N 0.722
GRMZM2G091044 Zea mays GRMZM2G091044 N 0.736
GRMZM2G131280 Zea mays GRMZM2G131280 N 0.736
GRMZM2G171934 Zea mays GRMZM2G171934 N 0.722
GRMZM2G408887 Zea mays GRMZM2G408887 N 0.733
GSMUA_Achr11G17810_001 Musa acuminata GSMUA_Achr11G17810_001 N 0.722
GSMUA_Achr2G18160_001 Musa acuminata GSMUA_Achr2G18160_001 N 0.722
GSMUA_Achr4G19110_001 Musa acuminata GSMUA_Achr4G19110_001 N 0.722
GSMUA_Achr4G27280_001 Musa acuminata GSMUA_Achr4G27280_001 N 0.708
GSMUA_Achr5G03420_001 Musa acuminata GSMUA_Achr5G03420_001 N 0.750
GSMUA_Achr5G13970_001 Musa acuminata GSMUA_Achr5G13970_001 N 0.722
GSMUA_Achr5G18120_001 Musa acuminata GSMUA_Achr5G18120_001 N 0.736
GSMUA_Achr7G04460_001 Musa acuminata GSMUA_Achr7G04460_001 N 0.716
GSMUA_Achr8G14740_001 Musa acuminata GSMUA_Achr8G14740_001 N 0.708
GSMUA_AchrUn_randomG07560_001 Musa acuminata GSMUA_AchrUn_randomG07560_001 N 0.728
LPERR02G23300 Leersia perrieri LPERR02G23300 N 0.736
LPERR04G19240 Leersia perrieri LPERR04G19240 N 0.736
MLOC_23439 Hordeum vulgare MLOC_23439 N 0.709
MLOC_63157 Hordeum vulgare MLOC_63157 N 0.722
MLOC_69202 Hordeum vulgare MLOC_69202 N 0.736
MTR_1g062160 Medicago truncatula MTR_1g062160 N 0.764
MTR_5g030130 Medicago truncatula MTR_5g030130 N 0.736
MTR_7g102790 Medicago truncatula MTR_7g102790 N 0.778
MTR_8g066820 Medicago truncatula MTR_8g066820 N 0.722
OB02G35810 Oryza brachyantha OB02G35810 N 0.736
OB04G30420 Oryza brachyantha OB04G30420 N 0.736
OB10G26540 Oryza brachyantha OB10G26540 N 0.722
OBART02G28660 Oryza barthii OBART02G28660 N 0.736
OBART04G23520 Oryza barthii OBART04G23520 N 0.736
OGLUM02G29250 Oryza glumaepatula OGLUM02G29250 N 0.736
OGLUM04G23440 Oryza glumaepatula OGLUM04G23440 N 0.736
OLONG_023395 Oryza longistaminata OLONG_023395 N 0.736
ONIVA02G31400 Oryza nivara ONIVA02G31400 N 0.736
ONIVA04G22750 Oryza nivara ONIVA04G22750 N 0.736
OPUNC02G26310 Oryza punctata OPUNC02G26310 N 0.736
OPUNC04G21040 Oryza punctata OPUNC04G21040 N 0.736
ORGLA02G0246600 Oryza glaberrima ORGLA02G0246600 N 0.736
ORGLA04G0200500 Oryza glaberrima ORGLA04G0200500 N 0.736
ORUFI02G30220 Oryza rufipogon ORUFI02G30220 N 0.736
ORUFI04G25190 Oryza rufipogon ORUFI04G25190 N 0.736
OS02G0692700 Oryza sativa OS02G0692700 N 0.736
OS04G0591100 Oryza sativa OS04G0591100 N 0.736
PGSC0003DMG400008598 Solanum tuberosum PGSC0003DMG400008598 N 0.806
PGSC0003DMG400017518 Solanum tuberosum PGSC0003DMG400017518 N 0.708
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N 0.750
POPTR_0001s21990 Populus trichocarpa POPTR_0001s21990 N 0.770
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N 0.750
POPTR_0006s12100 Populus trichocarpa POPTR_0006s12100 N 0.792
POPTR_0009s00830 Populus trichocarpa POPTR_0009s00830 N 0.784
POPTR_0016s10920 Populus trichocarpa POPTR_0016s10920 N 0.764
PRUPE_ppa010445mg Prunus persica PRUPE_ppa010445mg N 0.722
PRUPE_ppa011266mg Prunus persica PRUPE_ppa011266mg N 0.722
PRUPE_ppa011458mg Prunus persica PRUPE_ppa011458mg N 0.728
PRUPE_ppa011630mg Prunus persica PRUPE_ppa011630mg N 0.753
Sb04g031230 Sorghum bicolor Sb04g031230 N 0.736
Sb06g027000 Sorghum bicolor Sb06g027000 N 0.736
Sb07g024020 Sorghum bicolor Sb07g024020 N 0.722
Si010911m.g Setaria italica Si010911m.g N 0.736
Si017318m.g Setaria italica Si017318m.g N 0.722
Solyc10g085800.1 Solanum lycopersicum Solyc10g085800.1 N 0.795
TCM_015701 Theobroma cacao TCM_015701 N 0.722
TCM_022356 Theobroma cacao TCM_022356 N 0.806
TCM_041560 Theobroma cacao TCM_041560 N 0.776
Traes_1BL_C202F3DE1 Triticum aestivum Traes_1BL_C202F3DE1 N 0.729
Traes_2AL_74EFA5757 Triticum aestivum Traes_2AL_74EFA5757 N 0.722
Traes_2BL_69847FCA6 Triticum aestivum Traes_2BL_69847FCA6 N 0.722
Traes_6DL_CF3557CFC Triticum aestivum Traes_6DL_CF3557CFC N 0.722
Traes_7AS_9EA289C71 Triticum aestivum Traes_7AS_9EA289C71 N 0.709
Traes_7DS_620E0D488 Triticum aestivum Traes_7DS_620E0D488 N 0.709
TRIUR3_25489 Triticum urartu TRIUR3_25489 N 0.722
TRIUR3_30366 Triticum urartu TRIUR3_30366 N 0.722
TRIUR3_34039 Triticum urartu TRIUR3_34039 N 0.705
VIT_02s0012g01400 Vitis vinifera VIT_02s0012g01400 N 0.736
VIT_08s0007g04560 Vitis vinifera VIT_08s0007g04560 N 0.819
Ca_00735 Cicer arietinum Ca_00735 N 0.764
Ca_11505 Cicer arietinum Ca_11505 N 0.736
Ca_12361 Cicer arietinum Ca_12361 N 0.722
Ca_17446 Cicer arietinum Ca_17446 N 0.704
Ca_19047 Cicer arietinum Ca_19047 N 0.792
Cla001071 Citrullus lanatus Cla001071 N 0.797
Cla008966 Citrullus lanatus Cla008966 N 0.736
Cla016461 Citrullus lanatus Cla016461 N 0.736
Cla018029 Citrullus lanatus Cla018029 N 0.806
Pm001175 Prunus mume Pm001175 N 0.808
Pm012470 Prunus mume Pm012470 N 0.808
Pm022874 Prunus mume Pm022874 N 0.722
Pm023220 Prunus mume Pm023220 N 0.708
Pm026291 Prunus mume Pm026291 N 0.753
29589.m001281 Ricinus communis 29589.m001281 N 0.760
30054.m000824 Ricinus communis 30054.m000824 N 0.750
30078.m002228 Ricinus communis 30078.m002228 N 0.778
cassava15058.m1 Manihot esculenta cassava15058.m1 N 0.716
cassava2216.valid.m1 Manihot esculenta cassava2216.valid.m1 N 0.736
cassava28497.m1 Manihot esculenta cassava28497.m1 N 0.757
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N 0.750
cassava9017.m1 Manihot esculenta cassava9017.m1 N 0.778
Cucsa.200310 Cucumis sativus Cucsa.200310 N 0.784
Cucsa.313040 Cucumis sativus Cucsa.313040 N 0.736
Cucsa.321900 Cucumis sativus Cucsa.321900 N 0.746
Cucsa.378840 Cucumis sativus Cucsa.378840 N 0.819
e_gw1.1.253.1 Physcomitrella patens e_gw1.1.253.1 N 0.736
e_gw1.6.367.1 Physcomitrella patens e_gw1.6.367.1 N 0.736
estExt_gwp_gw1.C_1330066 Physcomitrella patens estExt_gwp_gw1.C_1330066 N 0.750
fgenesh1_pg.scaffold_102000043 Physcomitrella patens fgenesh1_pg.scaffold_102000043 N 0.750
mgf006916m Mimulus guttatus mgf006916m N 0.747
mgf013167m Mimulus guttatus mgf013167m N 0.747
mgf023930m Mimulus guttatus mgf023930m N 0.819
Aquca_005_00468 Aquilegia coerulea Aquca_005_00468 N 0.722
Aquca_009_01064 Aquilegia coerulea Aquca_009_01064 N 0.806
Aquca_019_00150 Aquilegia coerulea Aquca_019_00150 N 0.778
Bostr.27991s0138 Boechera stricta Bostr.27991s0138 N 0.988
Bostr.3359s0088 Boechera stricta Bostr.3359s0088 N 0.722
Cagra.15046s0001 Capsella grandiflora Cagra.15046s0001 N 1.000
Cagra.4962s0001 Capsella grandiflora Cagra.4962s0001 N 0.722
Carubv10009979m.g Capsella rubella Carubv10009979m.g N 0.722
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N 0.764
Ciclev10012756m.g Citrus clementina Ciclev10012756m.g N 0.746
Eucgr.A01594 Eucalyptus grandis Eucgr.A01594 N 0.764
Eucgr.B03915 Eucalyptus grandis Eucgr.B03915 N 0.811
Eucgr.D02206 Eucalyptus grandis Eucgr.D02206 N 0.736
Eucgr.E00276 Eucalyptus grandis Eucgr.E00276 N 0.736
evm.TU.supercontig_30.61 Carica papaya evm.TU.supercontig_30.61 N 0.757
evm.TU.supercontig_5.128 Carica papaya evm.TU.supercontig_5.128 N 0.792
gene00954-v1.0-hybrid Fragaria vesca gene00954-v1.0-hybrid N 0.795
gene02186-v1.0-hybrid Fragaria vesca gene02186-v1.0-hybrid N 0.722
Gorai.001G117900 Gossypium raimondii Gorai.001G117900 N 0.782
Gorai.003G183000 Gossypium raimondii Gorai.003G183000 N 0.736
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N 0.806
Gorai.006G217100 Gossypium raimondii Gorai.006G217100 N 0.722
Gorai.007G032400 Gossypium raimondii Gorai.007G032400 N 0.708
Gorai.008G226100 Gossypium raimondii Gorai.008G226100 N 0.708
Gorai.009G411100 Gossypium raimondii Gorai.009G411100 N 0.795
Lus10000482.g Linum usitatissimum Lus10000482.g N 0.708
Lus10004577.g Linum usitatissimum Lus10004577.g N 0.736
Lus10027735.g Linum usitatissimum Lus10027735.g N 0.764
Lus10030968.g Linum usitatissimum Lus10030968.g N 0.736
Lus10035554.g Linum usitatissimum Lus10035554.g N 0.764
Lus10040082.g Linum usitatissimum Lus10040082.g N 0.736
MDP0000553473 Malus domestica MDP0000553473 N 0.722
MDP0000570901 Malus domestica MDP0000570901 N 0.722
orange1.1g026096m.g Citrus sinensis orange1.1g026096m.g N 0.708
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N 0.764
orange1.1g028382m.g Citrus sinensis orange1.1g028382m.g N 0.736
orange1.1g028583m.g Citrus sinensis orange1.1g028583m.g N 0.784
Pavir.Aa01152 Panicum virgatum Pavir.Aa01152 N 0.736
Pavir.Ab01769 Panicum virgatum Pavir.Ab01769 N 0.736
Pavir.Fa00017 Panicum virgatum Pavir.Fa00017 N 0.722
Pavir.Fb02226 Panicum virgatum Pavir.Fb02226 N 0.722
Pavir.Ga00766 Panicum virgatum Pavir.Ga00766 N 0.736
Pavir.Gb00818 Panicum virgatum Pavir.Gb00818 N 0.736
SapurV1A.0226s0270 Salix purpurea SapurV1A.0226s0270 N 0.819
SapurV1A.0288s0160 Salix purpurea SapurV1A.0288s0160 N 0.773
SapurV1A.0360s0060 Salix purpurea SapurV1A.0360s0060 N 0.757
SapurV1A.0555s0010 Salix purpurea SapurV1A.0555s0010 N 0.736
SapurV1A.1507s0030 Salix purpurea SapurV1A.1507s0030 N 0.736
SapurV1A.3839s0010 Salix purpurea SapurV1A.3839s0010 N 0.731
Thhalv10008750m.g Eutrema salsugineum Thhalv10008750m.g N 0.722
Thhalv10017279m.g Eutrema salsugineum Thhalv10017279m.g N 0.914
PK10752.1 Cannabis sativa PK10752.1 N 0.824
PK20928.1 Cannabis sativa PK20928.1 N 0.736
PK29286.1 Cannabis sativa PK29286.1 N 0.806
chr3.CM0396.500.nd Lotus japonicus chr3.CM0396.500.nd N 0.727
LjSGA_025747.1.1 Lotus japonicus LjSGA_025747.1.1 N 0.742
LjSGA_028172.2 Lotus japonicus LjSGA_028172.2 N 0.722