CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LCUP011134
(
Lucilia cuprina
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05044 (HPD)
IPR007738
LCUP011134
T316656_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pros-1
M00708_2.00
Caenorhabditis elegans
NNBRAGRHDN
NHDYCTYVNN
PBM
Narasimhan et al.(2015)
pTH9164
0.840
0.840
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP011134-PA
Prospero
1119
1168
TLTPMHLRKAKLMFFWVRYPSSSVLKMYFPDIKFNKNNTAQLVKWFSNFR
Links
Other
Prospero
family TFs
Other
Lucilia cuprina
TFs
84 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LBD23
Arabidopsis thaliana
AT3G26620
D
LBD24
Arabidopsis thaliana
AT3G26660
I
Bo00285s360
Brassica oleracea
Bo00285s360
I
Bo3g065910
Brassica oleracea
Bo3g065910
I
Bra025217
Brassica rapa
Bra025217
I
Bra032938
Brassica rapa
Bra032938
I
scaffold_500562.1
Arabidopsis lyrata
scaffold_500562.1
I
Bostr.0556s0333
Boechera stricta
Bostr.0556s0333
I
Cagra.3598s0013
Capsella grandiflora
Cagra.3598s0013
I
Carubv10018979m.g
Capsella rubella
Carubv10018979m.g
I
evm.TU.supercontig_1.335
Carica papaya
evm.TU.supercontig_1.335
I
evm.TU.supercontig_1.339
Carica papaya
evm.TU.supercontig_1.339
I
Thhalv10005497m.g
Eutrema salsugineum
Thhalv10005497m.g
I
Thhalv10015971m.g
Eutrema salsugineum
Thhalv10015971m.g
I
evm.TU.supercontig_50.154
Carica papaya
evm.TU.supercontig_50.154
N