NFATC1 (Loxodonta africana)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSLAFG00000008297 T317228_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFATC1
M02444_2.00 		Monodelphis domestica
NNDTTCCDNN
NNHGGAAHNN		 PBM
Weirauch et al.(2014)
pTH8401 		0.979 0.979
Nfatc1
M09360_2.00 		Mus musculus
KABTCANWBTTTCCW
WGGAAAVWNTGAVTM		 Misc
Kulakovskiy et al.(2013)
NFAC1_MOUSE.H11MO.0.A 		0.958 0.958
NFATC1
M02443_2.00 		Meleagris gallopavo
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8315 		0.944 0.944
NFATC1
M03449_2.00 		Homo sapiens
HKGRAAADDNWBTTTCCAYN
NRTGGAAAVWNHHTTTYCMD		 SELEX
Jolma et al.(2013)
NFATC1_1 		0.944 0.944
NFATC1
M03450_2.00 		Homo sapiens
TTTCCAYWRYGGAAA
TTTCCRYWRTGGAAA		 SELEX
Jolma et al.(2013)
NFATC1_2 		0.944 0.944
NFATC1
M03451_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Jolma et al.(2013)
NFATC1_3 		0.944 0.944
NFATC1
M02747_2.00 		Homo sapiens
DTTCCRYGGAA
TTCCRYGGAAH		 SELEX
Jolma et al.(2010)
NFATc1_dimer 		0.944 0.944
NFATC1
M02748_2.00 		Homo sapiens
GGAANDTTCC
GGAAHNTTCC		 SELEX
Jolma et al.(2010)
NFATc1_dimer_type2 		0.944 0.944
NFATC1
M02749_2.00 		Homo sapiens
WDTTTCCAY
RTGGAAAHW		 SELEX
Jolma et al.(2010)
NFATc1_monomer 		0.944 0.944
NFATC1
M05711_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_1 		0.944 0.944
NFATC1
M05712_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_2 		0.944 0.944
NFATC1
M09349_2.00 		Homo sapiens
HBYHWBWBTTTCCWB
VWGGAAAVWVWDRVD		 Misc
Kulakovskiy et al.(2013)
NFAC1_HUMAN.H11MO.0.B 		0.944 0.944
NFATC1
M09625_2.00 		Homo sapiens
WBTTTCCAYY
RRTGGAAAVW		 Misc
Heinz et al.(2010)
Jurkat-NFATC1_Jolma_et_al. 		0.944 0.944
NFATC1
M11232_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q4 		0.944 0.944
NFATC1
M11233_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5_01 		0.944 0.944
NFATC1
M11234_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5 		0.944 0.944
NFATC1
M05713_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_1 		0.944 0.944
NFATC1
M05714_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_2 		0.944 0.944
nfatc1
M02446_2.00 		Xenopus tropicalis
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8557 		0.930 0.930
NFATC3
M02440_2.00 		Homo sapiens
DNTTTCCRNN
NNYGGAAANH		 PBM
Weirauch et al.(2014)
pTH9192 		0.846 0.846
NFATC3
M05693_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_1 		0.846 0.846
NFATC3
M05694_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_2 		0.846 0.846
NFATC3
M05695_2.00 		Homo sapiens
DYGGAAANNNNNNNTTTCCRH
DYGGAAANNNNNNNTTTCCRH		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_3 		0.846 0.846
NFATC3
M09343_2.00 		Homo sapiens
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_HUMAN.H11MO.0.B 		0.846 0.846
Nfatc3
M09359_2.00 		Mus musculus
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_MOUSE.H11MO.0.B 		0.846 0.846
NFATC3
M11217_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q3 		0.846 0.846
NFATC3
M11218_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q5 		0.846 0.846
NFATC3
M05696_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_1 		0.846 0.846
NFATC3
M05697_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_2 		0.846 0.846
NFATC3
M05698_2.00 		Homo sapiens
RYGGAAANHNNNDNTTTCCRY
RYGGAAANHNNNDNTTTCCRY		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_3 		0.846 0.846
NFATC2
M02441_2.00 		Homo sapiens
WNTTTCCRHN
NDYGGAAANW		 PBM
Weirauch et al.(2014)
pTH9196 		0.832 0.832
NFATC2
M05705_2.00 		Homo sapiens
DTTTCCATGGAAAM
KTTTCCATGGAAAH		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_1 		0.832 0.832
NFATC2
M05706_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_2 		0.832 0.832
NFATC2
M09346_2.00 		Homo sapiens
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_HUMAN.H11MO.0.B 		0.832 0.832
Nfatc2
M09357_2.00 		Mus musculus
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_MOUSE.H11MO.0.C 		0.832 0.832
NFATC2
M11221_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q4 		0.832 0.832
NFATC2
M11222_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q5 		0.832 0.832
NFATC2
M11223_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q6 		0.832 0.832
NFATC2
M08462_2.00 		Homo sapiens
TTTTCCA
TGGAAAA		 COMPILED
Mathelier et al.(2014)
MA0152.1 		0.832 0.832
NFATC2
M05707_2.00 		Homo sapiens
NTTTCCGCGGAAAN
NTTTCCGCGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_1 		0.832 0.832
NFATC2
M05708_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_2 		0.832 0.832
NFATC4
M01306_2.00 		Homo sapiens
NNNWWWVYRN
NYRBWWWNNN		 PBM
Lambert et al.(2019)
pTH9347 		0.811 0.811
NFATC4
M05701_2.00 		Homo sapiens
DBTTTCCRYN
NRYGGAAAVH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_1 		0.811 0.811
NFATC4
M05702_2.00 		Homo sapiens
NKTTCCATGGAAMV
BKTTCCATGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_2 		0.811 0.811
NFATC4
M09345_2.00 		Homo sapiens
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_HUMAN.H11MO.0.C 		0.811 0.811
Nfatc4
M09354_2.00 		Mus musculus
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_MOUSE.H11MO.0.C 		0.811 0.811
NFATC4
M11219_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3_01 		0.811 0.811
NFATC4
M11220_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3 		0.811 0.811
NFATC4
M05703_2.00 		Homo sapiens
DNTTTCCRYN
NRYGGAAANH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_1 		0.811 0.811
NFATC4
M05704_2.00 		Homo sapiens
NKTTCCRYGGAAMN
NKTTCCRYGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_2 		0.811 0.811
ENSTNIG00000018271
M02445_2.00 		Tetraodon nigroviridis
DNDTTCCRNN
NNYGGAAHNH		 PBM
Weirauch et al.(2014)
pTH9005 		0.769 0.769
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000006954 Rel 388 548

Links

Other Rel family TFs
Other Loxodonta africana TFs

250 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GATA20 Arabidopsis thaliana AT2G18380 D
GATA19 Arabidopsis thaliana AT4G36620 D
GATA20 Arabidopsis lyrata Al_scaffold_0003_3815 I
MNP Arabidopsis lyrata Al_scaffold_0005_1952 I
AMTR_s00011p00253850 Amborella trichopoda AMTR_s00011p00253850 I
GATA18 Arabidopsis thaliana AT3G50870 I
BGIOSGA001076 Oryza indica BGIOSGA001076 I
BGIOSGA017544 Oryza indica BGIOSGA017544 I
GATA15 Oryza indica BGIOSGA020424 I
Bo1g005530 Brassica oleracea Bo1g005530 I
Bo3g019610 Brassica oleracea Bo3g019610 I
Bo7g010220 Brassica oleracea Bo7g010220 I
Bo7g064860 Brassica oleracea Bo7g064860 I
Bo7g100580 Brassica oleracea Bo7g100580 I
Bo7g118030 Brassica oleracea Bo7g118030 I
Bo8g080330 Brassica oleracea Bo8g080330 I
Bo9g026020 Brassica oleracea Bo9g026020 I
Bra006851 Brassica rapa Bra006851 I
Bra010563 Brassica rapa Bra010563 I
Bra011695 Brassica rapa Bra011695 I
Bra012080 Brassica rapa Bra012080 I
Bra012883 Brassica rapa Bra012883 I
Bra017766 Brassica rapa Bra017766 I
Bra036854 Brassica rapa Bra036854 I
Bra037221 Brassica rapa Bra037221 I
Bra039614 Brassica rapa Bra039614 I
BRADI2G14890 Brachypodium distachyon BRADI2G14890 I
BRADI2G45750 Brachypodium distachyon BRADI2G45750 I
F775_00859 Aegilops tauschii F775_00859 I
F775_42893 Aegilops tauschii F775_42893 I
GATA19 Arabidopsis lyrata fgenesh2_kg.7__409__AT4G36620.1 I
GLYMA02G06320 Glycine max GLYMA02G06320 I
GLYMA11G07350 Glycine max GLYMA11G07350 I
GLYMA11G25375 Glycine max GLYMA11G25375 I
GRMZM2G123909 Zea mays GRMZM2G123909 I
GRMZM2G325850 Zea mays GRMZM2G325850 I
GRMZM2G397616 Zea mays GRMZM2G397616 I
GSMUA_Achr11G17770_001 Musa acuminata GSMUA_Achr11G17770_001 I
GSMUA_Achr3G31070_001 Musa acuminata GSMUA_Achr3G31070_001 I
GSMUA_Achr6G27250_001 Musa acuminata GSMUA_Achr6G27250_001 I
GSMUA_Achr7G09030_001 Musa acuminata GSMUA_Achr7G09030_001 I
GSMUA_Achr7G25620_001 Musa acuminata GSMUA_Achr7G25620_001 I
LPERR01G21790 Leersia perrieri LPERR01G21790 I
LPERR05G21780 Leersia perrieri LPERR05G21780 I
LPERR05G22620 Leersia perrieri LPERR05G22620 I
MLOC_5372 Hordeum vulgare MLOC_5372 I
MLOC_62522 Hordeum vulgare MLOC_62522 I
MTR_5g020230 Medicago truncatula MTR_5g020230 I
MTR_8g077510 Medicago truncatula MTR_8g077510 I
OB01G34710 Oryza brachyantha OB01G34710 I
OB05G34480 Oryza brachyantha OB05G34480 I
OBART01G25510 Oryza barthii OBART01G25510 I
OBART05G26150 Oryza barthii OBART05G26150 I
OGLUM01G29320 Oryza glumaepatula OGLUM01G29320 I
OGLUM05G27770 Oryza glumaepatula OGLUM05G27770 I
OGLUM05G28510 Oryza glumaepatula OGLUM05G28510 I
OMERI01G23200 Oryza meridionalis OMERI01G23200 I
OMERI03G30220 Oryza meridionalis OMERI03G30220 I
OMERI05G23010 Oryza meridionalis OMERI05G23010 I
ONIVA01G28750 Oryza nivara ONIVA01G28750 I
ONIVA05G29020 Oryza nivara ONIVA05G29020 I
OPUNC01G25380 Oryza punctata OPUNC01G25380 I
OPUNC05G23750 Oryza punctata OPUNC05G23750 I
OPUNC05G24550 Oryza punctata OPUNC05G24550 I
ORGLA01G0208300 Oryza glaberrima ORGLA01G0208300 I
ORGLA05G0226400 Oryza glaberrima ORGLA05G0226400 I
ORGLA05G0233700 Oryza glaberrima ORGLA05G0233700 I
ORUFI01G28370 Oryza rufipogon ORUFI01G28370 I
ORUFI05G28050 Oryza rufipogon ORUFI05G28050 I
ORUFI05G28920 Oryza rufipogon ORUFI05G28920 I
OS01G0662800 Oryza sativa OS01G0662800 I
OS05G0567900 Oryza sativa OS05G0567900 I
GATA15 Oryza sativa OS05G0578900 I
PGSC0003DMG400003508 Solanum tuberosum PGSC0003DMG400003508 I
PGSC0003DMG400015502 Solanum tuberosum PGSC0003DMG400015502 I
POPTR_0005s12440 Populus trichocarpa POPTR_0005s12440 I
POPTR_0007s12930 Populus trichocarpa POPTR_0007s12930 I
PRUPE_ppa014930mg Prunus persica PRUPE_ppa014930mg I
Sb03g030310 Sorghum bicolor Sb03g030310 I
Sb09g028850 Sorghum bicolor Sb09g028850 I
Sb09g029510 Sorghum bicolor Sb09g029510 I
Si022366m.g Setaria italica Si022366m.g I
Si024214m.g Setaria italica Si024214m.g I
Solyc02g062760.2 Solanum lycopersicum Solyc02g062760.2 I
Solyc02g085190.1 Solanum lycopersicum Solyc02g085190.1 I
TCM_000376 Theobroma cacao TCM_000376 I
Traes_1AL_A1EA76E83 Triticum aestivum Traes_1AL_A1EA76E83 I
TRAES3BF091700010CFD_g Triticum aestivum TRAES3BF091700010CFD_g I
MNP Vitis vinifera VIT_04s0023g01840 I
Ca_02038 Cicer arietinum Ca_02038 I
Ca_16057 Cicer arietinum Ca_16057 I
Cla014435 Citrullus lanatus Cla014435 I
Cla014810 Citrullus lanatus Cla014810 I
Pm026628 Prunus mume Pm026628 I
29634.m002146 Ricinus communis 29634.m002146 I
cassava21185.m1 Manihot esculenta cassava21185.m1 I
cassava5664.m1 Manihot esculenta cassava5664.m1 I
Cucsa.106490 Cucumis sativus Cucsa.106490 I
Cucsa.127470 Cucumis sativus Cucsa.127470 I
mgf023982m Mimulus guttatus mgf023982m I
Aquca_007_00224 Aquilegia coerulea Aquca_007_00224 I
Aquca_010_00506 Aquilegia coerulea Aquca_010_00506 I
Bostr.18351s0307 Boechera stricta Bostr.18351s0307 I
Bostr.6864s0159 Boechera stricta Bostr.6864s0159 I
Bostr.7867s1518 Boechera stricta Bostr.7867s1518 I
Cagra.0926s0051 Capsella grandiflora Cagra.0926s0051 I
Carubv10007612m.g Capsella rubella Carubv10007612m.g I
Carubv10014541m.g Capsella rubella Carubv10014541m.g I
Carubv10017765m.g Capsella rubella Carubv10017765m.g I
Ciclev10026328m.g Citrus clementina Ciclev10026328m.g I
evm.TU.supercontig_6.118 Carica papaya evm.TU.supercontig_6.118 I
gene14763-v1.0-hybrid Fragaria vesca gene14763-v1.0-hybrid I
Gorai.003G014300 Gossypium raimondii Gorai.003G014300 I
Gorai.007G202900 Gossypium raimondii Gorai.007G202900 I
Gorai.008G067800 Gossypium raimondii Gorai.008G067800 I
Lus10028301.g Linum usitatissimum Lus10028301.g I
MDP0000253174 Malus domestica MDP0000253174 I
MDP0000310271 Malus domestica MDP0000310271 I
Pavir.Ca00998 Panicum virgatum Pavir.Ca00998 I
Pavir.Ea02338 Panicum virgatum Pavir.Ea02338 I
Pavir.Eb02678 Panicum virgatum Pavir.Eb02678 I
Pavir.J03293 Panicum virgatum Pavir.J03293 I
Pavir.J18346 Panicum virgatum Pavir.J18346 I
Pavir.J26908 Panicum virgatum Pavir.J26908 I
SapurV1A.0254s0200 Salix purpurea SapurV1A.0254s0200 I
SapurV1A.0978s0140 Salix purpurea SapurV1A.0978s0140 I
Thhalv10010986m.g Eutrema salsugineum Thhalv10010986m.g I
Thhalv10022854m.g Eutrema salsugineum Thhalv10022854m.g I
Thhalv10027520m.g Eutrema salsugineum Thhalv10027520m.g I
PK24471.1 Cannabis sativa PK24471.1 I
chr2.CM0249.1330.nc Lotus japonicus chr2.CM0249.1330.nc I
chr4.CM0283.270.nd Lotus japonicus chr4.CM0283.270.nd I