FIBRA_04592 (Fibroporia radiculosa)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 FIBRA_04592 T318608_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX1
M00066_2.00 		Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN		 PBM
Badis et al.(2008)
RFX1_4537 		0.653 0.430
RFX1
M07494_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1 		0.653 0.430
RFX1
M08600_2.00 		Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG		 Misc
DeBoer et al.(2011)
YLR176C_1478 		0.653 0.430
RFX1
M08601_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 Misc
DeBoer et al.(2011)
YLR176C_496 		0.653 0.430
RFX1
M11251_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RFX1_02 		0.653 0.430
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCM02491 RFX 214 292

Links

Other RFX family TFs
Other Fibroporia radiculosa TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RFX1 Saccharomyces cerevisiae YLR176C D 0.653
AMAG_10999 Allomyces macrogynus AMAG_10999 I 0.651
AMAG_11601 Allomyces macrogynus AMAG_11601 I 0.651
CAOG_00356 Capsaspora owczarzaki CAOG_00356 I 0.651
CIMG_05985 Coccidioides immitis CIMG_05985 I 0.651
CPAG_04140 Candida parapsilosis CPAG_04140 I 0.651
MCYG_06867 Microsporum canis MCYG_06867 I 0.650
SPPG_01648 Spizellomyces punctatus SPPG_01648 I 0.676
WUBG_07284 Wuchereria bancrofti WUBG_07284 I 0.651
A1O1_08600 Capronia coronata A1O1_08600 I 0.651
A1O5_04383 Cladophialophora psammophila A1O5_04383 I 0.651
A1O9_03272 Exophiala aquamarina A1O9_03272 I 0.650
A1Q1_00828 Trichosporon asahii A1Q1_00828 I 0.668
AACERI_AaceriAAL010W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL010W I 0.653
ACRE_029400 Acremonium chrysogenum ACRE_029400 I 0.652
AGABI2DRAFT_184602 Agaricus bisporus AGABI2DRAFT_184602 I 0.781
AGOS_AAL010W Ashbya gossypii AGOS_AAL010W I 0.653
ARB_07111 Arthroderma benhamiae ARB_07111 I 0.651
BAUCODRAFT_23427 Baudoinia compniacensis BAUCODRAFT_23427 I 0.654
BDDG_02784 Blastomyces dermatitidis BDDG_02784 I 0.655
Bm3804 Brugia malayi Bm3804 I 0.651
BN946_scf184858.g55 Trametes cinnabarina BN946_scf184858.g55 I 0.784
ACLA_009440 Aspergillus clavatus CADACLAG00001004 I 0.651
CADAFLAG00010851 Aspergillus flavus CADAFLAG00010851 I 0.651
AFUA_5G06120 Aspergillus fumigatus CADAFUAG00006202 I 0.651
CADANGAG00013568 Aspergillus niger CADANGAG00013568 I 0.651
ANIA_02296 Aspergillus nidulans CADANIAG00008989 I 0.651
CADAORAG00004061 Aspergillus oryzae CADAORAG00004061 I 0.651
ATEG_09416 Aspergillus terreus CADATEAG00008983 I 0.651
NFIA_036980 Neosartorya fischeri CADNFIAG00003299 I 0.651
CAGL0B04895g Candida glabrata CAGL0B04895g I 0.656
CAGL0H03751g Candida glabrata CAGL0H03751g I 0.652
CC1G_00311 Coprinopsis cinerea CC1G_00311 I 0.773
CERSUDRAFT_149026 Ceriporiopsis subvermispora CERSUDRAFT_149026 I 0.782
CORT_0D05100 Candida orthopsilosis CORT_0D05100 I 0.651
CPC735_025690 Coccidioides posadasii CPC735_025690 I 0.651
CY34DRAFT_103779 Suillus luteus CY34DRAFT_103779 I 0.781
DACRYDRAFT_45233 Dacryopinax sp DACRYDRAFT_45233 I 0.759
DICSQDRAFT_106385 Dichomitus squalens DICSQDRAFT_106385 I 0.784
DOTSEDRAFT_132769 Dothistroma septosporum DOTSEDRAFT_132769 I 0.654
DRE_06212 Drechslerella stenobrocha DRE_06212 I 0.650
E5Q_03025 Mixia osmundae E5Q_03025 I 0.692
E5Q_03026 Mixia osmundae E5Q_03026 I 0.692
EURHEDRAFT_516724 Aspergillus ruber EURHEDRAFT_516724 I 0.651
FOMPIDRAFT_1038544 Fomitopsis pinicola FOMPIDRAFT_1038544 I 0.781
GALMADRAFT_236082 Galerina marginata GALMADRAFT_236082 I 0.781
GLOTRDRAFT_32962 Gloeophyllum trabeum GLOTRDRAFT_32962 I 0.780
GNLVRS01_PISO0E08012g Millerozyma farinosa GNLVRS01_PISO0E08012g I 0.654
GNLVRS01_PISO0F09355g Millerozyma farinosa GNLVRS01_PISO0F09355g I 0.654
GSTUM_00005211001 Tuber melanosporum GSTUM_00005211001 I 0.665
H101_06747 Trichophyton interdigitale H101_06747 I 0.651
H102_04304 Trichophyton rubrum H102_04304 I 0.651
HCBG_05483 Histoplasma capsulatum HCBG_05483 I 0.653
HelroG82191 Helobdella robusta HelroG82191 I 0.655
HETIRDRAFT_170415 Heterobasidion irregulare HETIRDRAFT_170415 I 0.781
HMPREF1120_04684 Exophiala dermatitidis HMPREF1120_04684 I 0.651
JAAARDRAFT_166855 Jaapia argillacea JAAARDRAFT_166855 I 0.780
K443DRAFT_673983 Laccaria amethystina K443DRAFT_673983 I 0.781
KAFR_0I02180 Kazachstania africana KAFR_0I02180 I 0.654
LACBIDRAFT_311799 Laccaria bicolor LACBIDRAFT_311799 I 0.781
LOAG_17230 Loa loa LOAG_17230 I 0.651
M378DRAFT_67300 Amanita muscaria M378DRAFT_67300 I 0.781
M404DRAFT_124798 Pisolithus tinctorius M404DRAFT_124798 I 0.779
M407DRAFT_70388 Tulasnella calospora M407DRAFT_70388 I 0.778
M413DRAFT_306124 Hebeloma cylindrosporum M413DRAFT_306124 I 0.781
MCYG_06867 Arthroderma otae MCYG_06867 I 0.650
MGYG_03742 Microsporum gypseum MGYG_03742 I 0.651
ML02801a Mnemiopsis leidyi ML02801a I 0.653
MVLG_04348 Microbotryum violaceum MVLG_04348 I 0.679
MYCFIDRAFT_10959 Pseudocercospora fijiensis MYCFIDRAFT_10959 I 0.655
Mycgr3G110369 Zymoseptoria tritici Mycgr3G110369 I 0.658
NCAS_0C04880 Naumovozyma castellii NCAS_0C04880 I 0.651
NEPG_00460 Nematocida parisii ertm1 NEPG_00460 I 0.655
NERG_01713 Nematocida sp NERG_01713 I 0.657
O9G_004738 Rozella allomycis O9G_004738 I 0.662
PAAG_00480 Paracoccidioides sp lutzii PAAG_00480 I 0.653
PABG_06744 Paracoccidioides brasiliensis PABG_06744 I 0.653
PAXRUDRAFT_31952 Paxillus rubicundulus PAXRUDRAFT_31952 I 0.781
PCH_Pc20g01690 Penicillium rubens PCH_Pc20g01690 I 0.651
PDE_02161 Penicillium oxalicum PDE_02161 I 0.651
PDIP_47410 Penicillium digitatum PDIP_47410 I 0.651
PEX1_087840 Penicillium expansum PEX1_087840 I 0.651
PGTG_11391 Puccinia graminis PGTG_11391 I 0.728
PHACADRAFT_25186 Phanerochaete carnosa PHACADRAFT_25186 I 0.781
PHLGIDRAFT_115381 Phlebiopsis gigantea PHLGIDRAFT_115381 I 0.781
PICST_78645 Scheffersomyces stipitis PICST_78645 I 0.651
PILCRDRAFT_94503 Piloderma croceum PILCRDRAFT_94503 I 0.781
PISMIDRAFT_670796 Pisolithus microcarpus PISMIDRAFT_670796 I 0.779
PITC_028740 Penicillium italicum PITC_028740 I 0.651
PLEOSDRAFT_1038101 Pleurotus ostreatus PLEOSDRAFT_1038101 I 0.783
PMAA_084960 Talaromyces marneffei PMAA_084960 I 0.652
PNEG_02893 Pneumocystis murina PNEG_02893 I 0.664
PTTG_01668 Puccinia triticina PTTG_01668 I 0.709
PV05_05335 Exophiala xenobiotica PV05_05335 I 0.651
PV06_00023 Exophiala oligosperma PV06_00023 I 0.651
PV07_06647 Cladophialophora immunda PV07_06647 I 0.650
PV08_04071 Exophiala spinifera PV08_04071 I 0.651
PV10_05596 Exophiala mesophila PV10_05596 I 0.651
PVAR5_6603 Byssochlamys spectabilis PVAR5_6603 I 0.652
SCHCODRAFT_71685 Schizophyllum commune SCHCODRAFT_71685 I 0.781
SCLCIDRAFT_138144 Scleroderma citrinum SCLCIDRAFT_138144 I 0.779
SEPMUDRAFT_46603 Sphaerulina musiva SEPMUDRAFT_46603 I 0.652
SERLA73DRAFT_85891 Serpula lacrymans SERLA73DRAFT_85891 I 0.781
SJAG_04839 Schizosaccharomyces japonicus SJAG_04839 I 0.658
SOCG_01623 Schizosaccharomyces octosporus SOCG_01623 I 0.652
sak1 Schizosaccharomyces pombe SPAC3G9.14 I 0.659
SPAPADRAFT_70246 Spathaspora passalidarum SPAPADRAFT_70246 I 0.652
SPOG_03909 Schizosaccharomyces cryophilus SPOG_03909 I 0.651
TDEL_0B05980 Torulaspora delbrueckii TDEL_0B05980 I 0.654
TEQG_02965 Trichophyton equinum TEQG_02965 I 0.651
TESG_00180 Trichophyton tonsurans TESG_00180 I 0.651
tetur19g03130 Tetranychus urticae tetur19g03130 I 0.650
TRV_04907 Trichophyton verrucosum TRV_04907 I 0.651
TSTA_119980 Talaromyces stipitatus TSTA_119980 I 0.652
U727_0043066021 Penicillium solitum U727_0043066021 I 0.651
UREG_04378 Uncinocarpus reesii UREG_04378 I 0.651
WBGene00247845 Onchocerca volvulus WBGene00247845 I 0.651
YALI0_E13596g Yarrowia lipolytica YALI0_E13596g I 0.656
Z517_10332 Fonsecaea pedrosoi Z517_10332 I 0.651
ZYRO0E04642g Zygosaccharomyces rouxii ZYRO0E04642g I 0.652
estExt_fgenesh1_pg.C_chr_80140 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80140 I 0.658
estExt_fgenesh2_pg.C_4710022 Branchiostoma floridae estExt_fgenesh2_pg.C_4710022 I 0.651
estExt_genewise1_worm.C_chr_6.10133 Pichia stipitis estExt_genewise1_worm.C_chr_6.10133 I 0.652
fgenesh1_pg.C_scaffold_2000774 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000774 I 0.781
gw1.15.255.1 Mycosphaerella fijiensis gw1.15.255.1 I 0.655
PredSwiss_ASS2010_3110.1 Pneumocystis carinii PredSwiss_ASS2010_3110.1 I 0.664
PredSwiss_CON653.4 Pneumocystis carinii PredSwiss_CON653.4 I 0.664
Scas_Contig488.2 Saccharomyces castellii Scas_Contig488.2 I 0.651
14959_Multiple Saccharomyces mikatae 14959_Multiple I 0.655
16177_Multiple Saccharomyces paradoxus 16177_Multiple I 0.653
EuGene4000430 Heterobasidion annosum EuGene4000430 I 0.781
fgenesh1_pg.00162_#_176 Aspergillus carbonarius fgenesh1_pg.00162_#_176 I 0.651
fgeneshTM_pg.2_#_559 Tremella mesenterica fgeneshTM_pg.2_#_559 I 0.691
Pc20g01690 Penicillium chrysogenum Pc20g01690 I 0.651
PMAA_084960 Penicillium marneffei PMAA_084960 I 0.652
SAKL0D08734g Lachancea kluyveri SAKL0D08734g I 0.656
ALUE_0001355401 Ascaris lumbricoides ALUE_0001355401 I 0.651
ASU_01592 Ascaris suum ASU_01592 I 0.651
EEL_0000135001 Elaeophora elaphi EEL_0000135001 I 0.651
EVEC_0001085201 Enterobius vermicularis EVEC_0001085201 I 0.652
GPLIN_000191300 Globodera pallida GPLIN_000191300 I 0.662
GPUH_0000252501 Gongylonema pulchrum GPUH_0000252501 I 0.650
nAv.1.0.1.g06901 Acanthocheilonema viteae nAv.1.0.1.g06901 I 0.651
nDi.2.2.2.g03767 Dirofilaria immitis nDi.2.2.2.g03767 I 0.651
nLs.2.1.2.g03959 Litomosoides sigmodontis nLs.2.1.2.g03959 I 0.651
nOo.2.0.1.g04858 Onchocerca ochengi nOo.2.0.1.g04858 I 0.651
OFLC_0000277501 Onchocerca flexuosa OFLC_0000277501 I 0.651
SMUV_0001085601 Syphacia muris SMUV_0001085601 I 0.653
TCNE_0001843801 Toxocara canis TCNE_0001843801 I 0.651
BOTBODRAFT_100719 Botryobasidium botryosum BOTBODRAFT_100719 N 0.773
M408DRAFT_113587 Serendipita vermifera M408DRAFT_113587 N 0.760
Moror_7356 Moniliophthora roreri Moror_7356 N 0.776
PIIN_08876 Piriformospora indica PIIN_08876 N 0.765
V565_046180 Rhizoctonia solani V565_046180 N 0.767