AFUN010424 (Anopheles funestus)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 AFUN010424 T319751_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.737 0.737
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.737 0.737
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.737 0.737
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.737 0.737
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.737 0.737
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.737 0.737
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.737 0.737
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.737 0.737
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.737 0.737
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.737 0.737
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.737 0.737
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.737 0.737
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.727 0.727
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.727 0.727
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.727 0.727
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.727 0.727
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.727 0.727
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.727 0.727
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.727 0.727
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.727 0.727
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.727 0.727
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.727 0.727
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.727 0.727
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.727 0.727
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.707 0.707
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.707 0.707
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.707 0.707
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.707 0.707
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.707 0.707
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.707 0.707
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.707 0.707
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.707 0.707
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.707 0.707
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.707 0.707
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.707 0.707
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AFUN010424-PA Runt 144 243

Links

Other Runt family TFs
Other Anopheles funestus TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARNTL Homo sapiens ENSG00000133794 D 0.000
Arntl Rattus norvegicus ENSRNOG00000014448 D 0.000
Arntl Mus musculus ENSMUSG00000055116 D 0.000
ARNTL Vicugna pacos ENSVPAG00000005926 I 0.000
ENSXMAG00000015619 Xiphophorus maculatus ENSXMAG00000015619 I 0.000
ARNTL Tursiops truncatus ENSTTRG00000013925 I 0.000
ENSTSYG00000000577 Tarsius syrichta ENSTSYG00000000577 I 0.000
arntl1a Takifugu rubripes ENSTRUG00000008391 I 0.000
arntl2 Takifugu rubripes ENSTRUG00000007832 I 0.000
arntl2 Tetraodon nigroviridis ENSTNIG00000012142 I 0.000
arntl1a Tetraodon nigroviridis ENSTNIG00000005490 I 0.000
ENSTGUG00000015954 Taeniopygia guttata ENSTGUG00000015954 I 0.000
ENSTGUG00000014839 Taeniopygia guttata ENSTGUG00000014839 I 0.000
ARNTL Tupaia belangeri ENSTBEG00000017387 I 0.000
ENSSTOG00000022144 Ictidomys tridecemlineatus ENSSTOG00000022144 I 0.000
ARNTL Sus scrofa ENSSSCG00000013397 I 0.000
ENSSHAG00000017357 Sarcophilus harrisii ENSSHAG00000017357 I 0.000
ARNTL Pteropus vampyrus ENSPVAG00000006712 I 0.000
ARNTL Pan troglodytes ENSPTRG00000003376 I 0.000
ENSPSIG00000013131 Pelodiscus sinensis ENSPSIG00000013131 I 0.000
ENSPPYG00000003473 Pongo abelii ENSPPYG00000003473 I 0.000
ENSPMAG00000004171 Petromyzon marinus ENSPMAG00000004171 I 0.000
ENSPFOG00000016287 Poecilia formosa ENSPFOG00000016287 I 0.000
Gfo_R013617 Geospiza fortis Gfo_R013617 I 0.000
arntl.S Xenopus laevis XB-GENE-495459 I 0.000
arntl Xenopus tropicalis XB-GENE-495455 I 0.000
arntl.L Xenopus laevis XB-GENE-17342306 I 0.000
Ocbimv22023737m.g Octopus bimaculoides Ocbimv22023737m.g I 0.000
fgenesh2_pg.scaffold_792000016 Branchiostoma floridae fgenesh2_pg.scaffold_792000016 I 0.000
fgenesh2_pg.scaffold_279000045 Branchiostoma floridae fgenesh2_pg.scaffold_279000045 I 0.000
Tal_R003521 Tyto alba Tal_R003521 I 0.000
Pvit_10294 Pogona vitticeps Pvit_10294 I 0.000
Ogr18318 Ophisaurus gracilis Ogr18318 I 0.000
Myotis_brandtii_Arntl_10004678 Myotis brandtii Myotis_brandtii_Arntl_10004678 I 0.000
ENSXMAG00000001482 Xiphophorus maculatus ENSXMAG00000001482 I 0.000
ENSP00000384517 Macaca fascicularis ENSP00000384517 I 0.000
ENSBTAP00000017323-D1 Bos grunniens ENSBTAP00000017323-D1 I 0.000
Cmyd_10009262 Chelonia mydas Cmyd_10009262 I 0.000
Brh_R010633 Buceros rhinoceros Brh_R010633 I 0.000
Alligator_sinensis_CCG000787.1 Alligator sinensis Alligator_sinensis_CCG000787.1 I 0.000
Afo_R014608 Aptenodytes forsteri Afo_R014608 I 0.000
Aan_R006598 Calypte anna Aan_R006598 I 0.000
NEMVEDRAFT_v1g224692 Nematostella vectensis NEMVEDRAFT_v1g224692 I 0.000
NEMVEDRAFT_v1g132249 Nematostella vectensis NEMVEDRAFT_v1g132249 I 0.000
arntl1a Oryzias latipes ENSORLG00000019370 I 0.000
ARNTL Cavia porcellus ENSCPOG00000008795 I 0.000
ARNTL Gallus gallus ENSGALG00000005378 I 0.000
arntl1a Gasterosteus aculeatus ENSGACG00000002445 I 0.000
ARNTL Felis catus ENSFCAG00000010983 I 0.000
ENSFALG00000010646 Ficedula albicollis ENSFALG00000010646 I 0.000
ARNTL Equus caballus ENSECAG00000012118 I 0.000
ARNTL Dasypus novemcinctus ENSDNOG00000003841 I 0.000
arntl2 Danio rerio ENSDARG00000041381 I 0.000
arntl1b Danio rerio ENSDARG00000035732 I 0.000
arntl1a Danio rerio ENSDARG00000006791 I 0.000
ENSCSAG00000004681 Chlorocebus sabaeus ENSCSAG00000004681 I 0.000
ARNTL Gorilla gorilla ENSGGOG00000013211 I 0.000
ARNTL Callithrix jacchus ENSCJAG00000010162 I 0.000
ARNTL Choloepus hoffmanni ENSCHOG00000000376 I 0.000
ARNTL Canis familiaris ENSCAFG00000008095 I 0.000
ARNTL Bos taurus ENSBTAG00000013029 I 0.000
ENSAPLG00000003885 Anas platyrhynchos ENSAPLG00000003885 I 0.000
ENSAMXG00000020233 Astyanax mexicanus ENSAMXG00000020233 I 0.000
ENSAMXG00000011758 Astyanax mexicanus ENSAMXG00000011758 I 0.000
ENSAMXG00000010089 Astyanax mexicanus ENSAMXG00000010089 I 0.000
ENSAMEG00000002309 Ailuropoda melanoleuca ENSAMEG00000002309 I 0.000
ARNTL Anolis carolinensis ENSACAG00000004497 I 0.000
ENSMPUG00000013135 Mustela putorius furo ENSMPUG00000013135 I 0.000
CGI_10025278 Crassostrea gigas CGI_10025278 I 0.000
arntl2 Oryzias latipes ENSORLG00000010946 I 0.000
ARNTL Ochotona princeps ENSOPRG00000004853 I 0.000
ENSONIG00000014665 Oreochromis niloticus ENSONIG00000014665 I 0.000
ENSONIG00000010970 Oreochromis niloticus ENSONIG00000010970 I 0.000
ARNTL Otolemur garnettii ENSOGAG00000000736 I 0.000
ARNTL Oryctolagus cuniculus ENSOCUG00000005940 I 0.000
ENSOARG00000007809 Ovis aries ENSOARG00000007809 I 0.000
ENSOANG00000000503 Ornithorhynchus anatinus ENSOANG00000000503 I 0.000
ENSNLEG00000017674 Nomascus leucogenys ENSNLEG00000017674 I 0.000
ENSPFOG00000008027 Poecilia formosa ENSPFOG00000008027 I 0.000
ARNTL Monodelphis domestica ENSMODG00000008708 I 0.000
ARNTL Macaca mulatta ENSMMUG00000009690 I 0.000
ARNTL Myotis lucifugus ENSMLUG00000008503 I 0.000
ENSMICG00000001229 Microcebus murinus ENSMICG00000001229 I 0.000
ARNTL Meleagris gallopavo ENSMGAG00000005349 I 0.000
ENSLOCG00000003999 Lepisosteus oculatus ENSLOCG00000003999 I 0.000
ARNTL Loxodonta africana ENSLAFG00000026673 I 0.000
ENSLACG00000004629 Latimeria chalumnae ENSLACG00000004629 I 0.000
ENSGMOG00000008906 Gadus morhua ENSGMOG00000008906 I 0.000