AMEM004753 (Anopheles merus)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 AMEM004753 T319757_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.831 0.831
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.708 0.708
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.708 0.708
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.708 0.708
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.708 0.708
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.700 0.700
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.700 0.700
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.700 0.700
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.700 0.700
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.700 0.700
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.700 0.700
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.700 0.700
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.700 0.700
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.700 0.700
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.700 0.700
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.700 0.700
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AMEM004753-PA Runt 27 156

Links

Other Runt family TFs
Other Anopheles merus TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
hlh-1 Caenorhabditis elegans WBGene00001948 D
BXY_0489100 Bursaphelenchus xylophilus BXY_0489100 I
TELCIR_14945 Teladorsagia circumcincta TELCIR_14945 I
TELCIR_07640 Teladorsagia circumcincta TELCIR_07640 I
TCLT_0000019401 Thelazia callipaeda TCLT_0000019401 I
SMUV_0000995901 Syphacia muris SMUV_0000995901 I
OFLC_0000064301 Onchocerca flexuosa OFLC_0000064301 I
nOo.2.0.1.g00910 Onchocerca ochengi nOo.2.0.1.g00910 I
nLs.2.1.2.g06915 Litomosoides sigmodontis nLs.2.1.2.g06915 I
NECAME_14163 Necator americanus NECAME_14163 I
nDi.2.2.2.g00288 Dirofilaria immitis nDi.2.2.2.g00288 I
nAv.1.0.1.g02052 Acanthocheilonema viteae nAv.1.0.1.g02052 I
HCOI02168200 Haemonchus contortus HCOI02168200 I
EVEC_0000720901 Enterobius vermicularis EVEC_0000720901 I
EEL_0000993601 Elaeophora elaphi EEL_0000993601 I
DICVIV_08170 Dictyocaulus viviparus DICVIV_08170 I
WUBG_05117 Wuchereria bancrofti WUBG_05117 I
ASU_01867 Ascaris suum ASU_01867 I
ASIM_0001156501 Anisakis simplex ASIM_0001156501 I
ANCCEY_00328 Ancylostoma ceylanicum ANCCEY_00328 I
ALUE_0000745301 Ascaris lumbricoides ALUE_0000745301 I
ACOC_0000253201 Angiostrongylus costaricensis ACOC_0000253201 I
WBGene00247572 Onchocerca volvulus WBGene00247572 I
Ppa-hlh-1 Pristionchus pacificus PPA08246 I
LOAG_16988 Loa loa LOAG_16988 I
CRE17301 Caenorhabditis remanei CRE17301 I
CJA13327 Caenorhabditis japonica CJA13327 I
CBN11281 Caenorhabditis brenneri CBN11281 I
CBG13470 Caenorhabditis briggsae CBG13470 I
Bm1750 Brugia malayi Bm1750 I