Pavir.Ea01492 (Panicum virgatum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Pavir.Ea01492 T321221_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea01492.1.p RWP-RK 48 96

Links

Other RWP-RK family TFs
Other Panicum virgatum TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MLOC_12609 Hordeum vulgare MLOC_12609 I 0.838
Sb10g008120 Sorghum bicolor Sb10g008120 I 0.755
Si008273m.g Setaria italica Si008273m.g I 0.755
OS06G0228950 Oryza sativa OS06G0228950 I 0.755
ORUFI06G08510 Oryza rufipogon ORUFI06G08510 I 0.755
Si020172m.g Setaria italica Si020172m.g I 0.784
ORGLA06G0077700 Oryza glaberrima ORGLA06G0077700 I 0.755
OPUNC06G07940 Oryza punctata OPUNC06G07940 I 0.755
Solyc03g116010.1 Solanum lycopersicum Solyc03g116010.1 I 0.714
ONIVA06G09450 Oryza nivara ONIVA06G09450 I 0.755
Traes_7DS_405F08A53 Triticum aestivum Traes_7DS_405F08A53 I 0.735
OMERI06G09770 Oryza meridionalis OMERI06G09770 I 0.755
TRIUR3_19503 Triticum urartu TRIUR3_19503 I 0.776
Ca_13151 Cicer arietinum Ca_13151 I 0.714
OB06G17750 Oryza brachyantha OB06G17750 I 0.755
MLOC_59560 Hordeum vulgare MLOC_59560 I 0.755
LPERR06G07570 Leersia perrieri LPERR06G07570 I 0.735
30138.m004071 Ricinus communis 30138.m004071 I 0.735
mg020279m Mimulus guttatus mg020279m I 0.714
GRMZM2G392306 Zea mays GRMZM2G392306 I 0.755
orange1.1g036926m.g Citrus sinensis orange1.1g036926m.g I 0.733
F775_07483 Aegilops tauschii F775_07483 I 0.735
Pavir.Aa00708 Panicum virgatum Pavir.Aa00708 I 0.714
Pavir.Ab02992 Panicum virgatum Pavir.Ab02992 I 0.735
Pavir.Da01160 Panicum virgatum Pavir.Da01160 I 0.755
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I 0.811
Pavir.J13146 Panicum virgatum Pavir.J13146 I 0.755
BGIOSGA022580 Oryza indica BGIOSGA022580 I 0.755
chr4.CM0087.990.nc Lotus japonicus chr4.CM0087.990.nc I 0.735
AC207342.3_FG001 Zea mays AC207342.3_FG001 N 0.918
Si005102m.g Setaria italica Si005102m.g N 0.959
Pavir.Eb01347 Panicum virgatum Pavir.Eb01347 N 1.000
fgenesh1_pg.scaffold_823000001 Physcomitrella patens fgenesh1_pg.scaffold_823000001 N 0.735
PDK_20s1788591g001 Phoenix dactylifera PDK_20s1788591g001 N 0.796
GSMUA_Achr4G08610_001 Musa acuminata GSMUA_Achr4G08610_001 N 0.837
AMTR_s00021p00218190 Amborella trichopoda AMTR_s00021p00218190 N 0.755
BGIOSGA001434 Oryza indica BGIOSGA001434 N 0.878
Bo9g108730 Brassica oleracea Bo9g108730 N 0.714
Bra003088 Brassica rapa Bra003088 N 0.714
BRADI2G40920 Brachypodium distachyon BRADI2G40920 N 0.918
BRADI2G61760 Brachypodium distachyon BRADI2G61760 N 0.816
F775_03178 Aegilops tauschii F775_03178 N 0.898
GRMZM2G071322 Zea mays GRMZM2G071322 N 0.959
Sb03g025130 Sorghum bicolor Sb03g025130 N 0.939
GSMUA_AchrUn_randomG11290_001 Musa acuminata GSMUA_AchrUn_randomG11290_001 N 0.837
LPERR01G16660 Leersia perrieri LPERR01G16660 N 0.918
OBART01G19230 Oryza barthii OBART01G19230 N 0.878
OGLUM01G22860 Oryza glumaepatula OGLUM01G22860 N 0.898
ONIVA01G21910 Oryza nivara ONIVA01G21910 N 0.878
OPUNC01G19590 Oryza punctata OPUNC01G19590 N 0.878
ORUFI01G21630 Oryza rufipogon ORUFI01G21630 N 0.878
POPTR_0015s01410 Populus trichocarpa POPTR_0015s01410 N 0.714