PDK_20s1399311g003 (Phoenix dactylifera)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 PDK_20s1399311g003 T321329_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.918 0.918
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.796 0.796
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1399311g003 RWP-RK 529 577

Links

Other RWP-RK family TFs
Other Phoenix dactylifera TFs

415 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g104810 Brassica oleracea Bo2g104810 I 0.000
Bra018490 Brassica rapa Bra018490 I 0.000
GLYMA11G33460 Glycine max GLYMA11G33460 I 0.000
GLYMA18G04760 Glycine max GLYMA18G04760 I 0.000
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.000
Lus10032108.g Linum usitatissimum Lus10032108.g I 0.000
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I 0.000
GLYMA18G05916 Glycine max GLYMA18G05916 N 0.000
GLYMA18G05963 Glycine max GLYMA18G05963 N 0.000
GLYMA18G05976 Glycine max GLYMA18G05976 N 0.000