Pavir.J02262 (Panicum virgatum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Pavir.J02262 T323641_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.946 0.747
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J02262.1.p SBP 89 163

Links

Other SBP family TFs
Other Panicum virgatum TFs

279 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TBX1 Homo sapiens ENSG00000184058 D
Tbx1 Mus musculus ENSMUSG00000009097 D
CpipJ_CPIJ007784 Culex pipiens CpipJ_CPIJ007784 I
AAEL018165 Aedes aegypti AAEL018165 I
ACYPI001903 Acyrthosiphon pisum ACYPI001903 I
BGIBMGA013132 Bombyx mori BGIBMGA013132 I
CapteG226618 Capitella teleta CapteG226618 I
CGI_10008753 Crassostrea gigas CGI_10008753 I
CPIJ007784 Culex quinquefasciatus CPIJ007784 I
DAPPUDRAFT_3881 Daphnia pulex DAPPUDRAFT_3881 I
ENSACAG00000008549 Anolis carolinensis ENSACAG00000008549 I
ENSAMEG00000001098 Ailuropoda melanoleuca ENSAMEG00000001098 I
ENSAMXG00000020444 Astyanax mexicanus ENSAMXG00000020444 I
TBX10 Bos taurus ENSBTAG00000011816 I
TBX10 Canis familiaris ENSCAFG00000011264 I
TBX1 Callithrix jacchus ENSCJAG00000014591 I
ENSCSAG00000008726 Chlorocebus sabaeus ENSCSAG00000008726 I
ENSCSAG00000011818 Chlorocebus sabaeus ENSCSAG00000011818 I
ENSCSAVG00000000786 Ciona savignyi ENSCSAVG00000000786 I
tbx1 Danio rerio ENSDARG00000031891 I
TBX1 Dasypus novemcinctus ENSDNOG00000035422 I
Tbx10 Dipodomys ordii ENSDORG00000010070 I
ENSFALG00000008041 Ficedula albicollis ENSFALG00000008041 I
TBX10 Felis catus ENSFCAG00000001760 I
ENSFCAG00000005446 Felis catus ENSFCAG00000005446 I
TBX10 Homo sapiens ENSG00000167800 I
tbx1 Gasterosteus aculeatus ENSGACG00000013057 I
ENSGALG00000003599 Gallus gallus ENSGALG00000003599 I
ENSGGOG00000009181 Gorilla gorilla ENSGGOG00000009181 I
TBX10 Gorilla gorilla ENSGGOG00000011961 I
ENSGMOG00000018613 Gadus morhua ENSGMOG00000018613 I
ENSLACG00000004994 Latimeria chalumnae ENSLACG00000004994 I
ENSLACG00000016333 Latimeria chalumnae ENSLACG00000016333 I
TBX1 Loxodonta africana ENSLAFG00000021555 I
ENSMEUG00000007568 Macropus eugenii ENSMEUG00000007568 I
ENSMEUG00000011624 Macropus eugenii ENSMEUG00000011624 I
ENSMGAG00000004357 Meleagris gallopavo ENSMGAG00000004357 I
ENSMMUG00000018529 Macaca mulatta ENSMMUG00000018529 I
TBX1 Monodelphis domestica ENSMODG00000021176 I
TBX10 Monodelphis domestica ENSMODG00000021334 I
ENSMPUG00000003900 Mustela putorius furo ENSMPUG00000003900 I
ENSMPUG00000004076 Mustela putorius furo ENSMPUG00000004076 I
Tbx10 Mus musculus ENSMUSG00000037477 I
ENSOARG00000013751 Ovis aries ENSOARG00000013751 I
TBX10 Otolemur garnettii ENSOGAG00000000784 I
TBX1 Otolemur garnettii ENSOGAG00000003596 I
ENSONIG00000015827 Oreochromis niloticus ENSONIG00000015827 I
tbx1 Oryzias latipes ENSORLG00000015256 I
ENSPANG00000006501 Papio anubis ENSPANG00000006501 I
ENSPANG00000015763 Papio anubis ENSPANG00000015763 I
TBX10 Procavia capensis ENSPCAG00000009585 I
TBX1 Procavia capensis ENSPCAG00000010176 I
ENSPFOG00000007309 Poecilia formosa ENSPFOG00000007309 I
ENSPFOG00000009540 Poecilia formosa ENSPFOG00000009540 I
ENSPFOG00000009621 Poecilia formosa ENSPFOG00000009621 I
TBX10 Pan troglodytes ENSPTRG00000003972 I
TBX10 Pteropus vampyrus ENSPVAG00000008592 I
Tbx1 Rattus norvegicus ENSRNOG00000001892 I
Tbx10 Rattus norvegicus ENSRNOG00000017944 I
ENSSTOG00000004505 Ictidomys tridecemlineatus ENSSTOG00000004505 I
ENSSTOG00000011629 Ictidomys tridecemlineatus ENSSTOG00000011629 I
TBX1 Taeniopygia guttata ENSTGUG00000008395 I
ENSTNIG00000014352 Tetraodon nigroviridis ENSTNIG00000014352 I
tbx1 Tetraodon nigroviridis ENSTNIG00000016767 I
tbx1 Takifugu rubripes ENSTRUG00000014017 I
GB55445 Apis mellifera GB55445 I
HMEL015536 Heliconius melpomene HMEL015536 I
KGM_08622 Danaus plexippus KGM_08622 I
L798_01101 Zootermopsis nevadensis L798_01101 I
LotgiG104372 Lottia gigantea LotgiG104372 I
NEMVEDRAFT_v1g214570 Nematostella vectensis NEMVEDRAFT_v1g214570 I
NEMVEDRAFT_v1g214571 Nematostella vectensis NEMVEDRAFT_v1g214571 I
NV11904 Nasonia vitripennis NV11904 I
PHUM607490 Pediculus humanus PHUM607490 I
SMAR009230 Strigamia maritima SMAR009230 I
TC015327 Tribolium castaneum TC015327 I
tetur04g00890 Tetranychus urticae tetur04g00890 I
YQE_10853 Dendroctonus ponderosae YQE_10853 I
Aan_R010744 Calypte anna Aan_R010744 I
Alligator_sinensis_CCG022145.1 Alligator sinensis Alligator_sinensis_CCG022145.1 I
Cflo_09868--XP_624689.2_APIME Camponotus floridanus Cflo_09868--XP_624689.2_APIME I
ENSBTAP00000015683-D1 Bos grunniens ENSBTAP00000015683-D1 I
ENSP00000331791-D2 Bos grunniens ENSP00000331791-D2 I
ENSP00000335191 Macaca fascicularis ENSP00000335191 I
Gfo_R011877 Geospiza fortis Gfo_R011877 I
Hsal_04471--XP_624689.2_APIME Harpegnathos saltator Hsal_04471--XP_624689.2_APIME I
Myotis_brandtii_Tbx10_10030825 Myotis brandtii Myotis_brandtii_Tbx10_10030825 I
Myotis_brandtii_Tbx1_10021844 Myotis brandtii Myotis_brandtii_Tbx1_10021844 I
Ogr08509 Ophisaurus gracilis Ogr08509 I
Pvit_15846 Pogona vitticeps Pvit_15846 I
Pvit_16222 Pogona vitticeps Pvit_16222 I
fgenesh2_kg.scaffold_118000001 Branchiostoma floridae fgenesh2_kg.scaffold_118000001 I
Sakowv30001714m.g Saccoglossus kowalevskii Sakowv30001714m.g I
CLEC006885 Cimex lectularius CLEC006885 I
LDEC008541 Leptinotarsa decemlineata LDEC008541 I
tbx1 Xenopus tropicalis XB-GENE-478084 I
tbx1.L Xenopus laevis XB-GENE-478088 I
tbx1.S Xenopus laevis XB-GENE-6254396 I
AALB002686 Anopheles albimanus AALB002686 I
AARA001806 Anopheles arabiensis AARA001806 I
AATE015045 Anopheles atroparvus AATE015045 I
ACUA026816 Anopheles culicifacies ACUA026816 I
ADIR010556 Anopheles dirus ADIR010556 I
AEPI001144 Anopheles epiroticus AEPI001144 I
AFAF008331 Anopheles farauti AFAF008331 I
AFUN001113 Anopheles funestus AFUN001113 I
AMAM012836 Anopheles maculatus AMAM012836 I
AMEC007874 Anopheles melas AMEC007874 I
AMEM018425 Anopheles merus AMEM018425 I
AMIN000536 Anopheles minimus AMIN000536 I
AQUA006531 Anopheles quadriannulatus AQUA006531 I
ASIS010497 Anopheles sinensis ASIS010497 I
LLOJ005386 Lutzomyia longipalpis LLOJ005386 I
MDOA001403 Musca domestica MDOA001403 I
DME_0000045201 Dracunculus medinensis DME_0000045201 N
L596_g22450 Steinernema carpocapsae L596_g22450 N
L892_g7838 Steinernema scapterisci L892_g7838 N
L898_g16606 Steinernema monticolum L898_g16606 N
nDi.2.2.2.g09215 Dirofilaria immitis nDi.2.2.2.g09215 N