OLONG_028119 (Oryza longistaminata)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 OLONG_028119 T323905_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_028119-R1 Sigma 70 122 193

Links

Other Sigma 70 family TFs
Other Oryza longistaminata TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZIC2 Homo sapiens ENSG00000043355 D
ZIC1 Homo sapiens ENSG00000152977 D
ZIC3 Homo sapiens ENSG00000156925 D
ZIC4 Homo sapiens ENSG00000174963 D
Zic1 Mus musculus ENSMUSG00000032368 D
Zic2 Mus musculus ENSMUSG00000061524 D
Zic3 Mus musculus ENSMUSG00000067860 D
CapteG160442 Capitella teleta CapteG160442 I
ENSACAG00000003681 Anolis carolinensis ENSACAG00000003681 I
ZIC1 Anolis carolinensis ENSACAG00000006947 I
ENSAMEG00000002144 Ailuropoda melanoleuca ENSAMEG00000002144 I
ENSAMEG00000002149 Ailuropoda melanoleuca ENSAMEG00000002149 I
ENSAMEG00000002684 Ailuropoda melanoleuca ENSAMEG00000002684 I
ENSAMEG00000004503 Ailuropoda melanoleuca ENSAMEG00000004503 I
ENSAMXG00000002320 Astyanax mexicanus ENSAMXG00000002320 I
ENSAMXG00000002323 Astyanax mexicanus ENSAMXG00000002323 I
ENSAMXG00000010931 Astyanax mexicanus ENSAMXG00000010931 I
ENSAMXG00000010941 Astyanax mexicanus ENSAMXG00000010941 I
ENSAMXG00000012325 Astyanax mexicanus ENSAMXG00000012325 I
ENSAPLG00000002960 Anas platyrhynchos ENSAPLG00000002960 I
ENSAPLG00000003027 Anas platyrhynchos ENSAPLG00000003027 I
ENSAPLG00000010556 Anas platyrhynchos ENSAPLG00000010556 I
ZIC4 Bos taurus ENSBTAG00000014749 I
ZIC1 Bos taurus ENSBTAG00000014751 I
ZIC3 Bos taurus ENSBTAG00000021413 I
ZIC2 Bos taurus ENSBTAG00000025246 I
ZIC2 Canis familiaris ENSCAFG00000005835 I
ZIC4 Canis familiaris ENSCAFG00000008194 I
ZIC3 Canis familiaris ENSCAFG00000018979 I
ZIC1 Callithrix jacchus ENSCJAG00000001524 I
ZIC3 Callithrix jacchus ENSCJAG00000013792 I
ZIC2 Callithrix jacchus ENSCJAG00000020988 I
ENSCPOG00000002374 Cavia porcellus ENSCPOG00000002374 I
ZIC4 Cavia porcellus ENSCPOG00000010981 I
ZIC2 Cavia porcellus ENSCPOG00000026926 I
ENSCSAG00000007453 Chlorocebus sabaeus ENSCSAG00000007453 I
ENSCSAG00000011405 Chlorocebus sabaeus ENSCSAG00000011405 I
ENSCSAG00000011409 Chlorocebus sabaeus ENSCSAG00000011409 I
ENSCSAG00000017494 Chlorocebus sabaeus ENSCSAG00000017494 I
zic2a Danio rerio ENSDARG00000015554 I
zic1 Danio rerio ENSDARG00000015567 I
zic5 Danio rerio ENSDARG00000016022 I
zic4 Danio rerio ENSDARG00000031307 I
zic2b Danio rerio ENSDARG00000037178 I
zic3 Danio rerio ENSDARG00000071497 I
ZIC4 Dasypus novemcinctus ENSDNOG00000001881 I
ZIC3 Dasypus novemcinctus ENSDNOG00000006192 I
ZIC2 Dasypus novemcinctus ENSDNOG00000043170 I
ZIC1 Dasypus novemcinctus ENSDNOG00000047101 I
ENSDORG00000014318 Dipodomys ordii ENSDORG00000014318 I
ZIC3 Equus caballus ENSECAG00000013318 I
ZIC2 Equus caballus ENSECAG00000018593 I
ZIC4 Equus caballus ENSECAG00000020070 I
ZIC4 Erinaceus europaeus ENSEEUG00000000251 I
ZIC2 Erinaceus europaeus ENSEEUG00000013747 I
ZIC2 Echinops telfairi ENSETEG00000007329 I
ZIC3 Echinops telfairi ENSETEG00000018846 I
ENSFALG00000003772 Ficedula albicollis ENSFALG00000003772 I
ENSFALG00000004344 Ficedula albicollis ENSFALG00000004344 I
ENSFALG00000007091 Ficedula albicollis ENSFALG00000007091 I
ENSFALG00000007094 Ficedula albicollis ENSFALG00000007094 I
ZIC4 Felis catus ENSFCAG00000007059 I
ZIC1 Felis catus ENSFCAG00000007061 I
ZIC3 Felis catus ENSFCAG00000025684 I
ENSFCAG00000030117 Felis catus ENSFCAG00000030117 I
zic2b Gasterosteus aculeatus ENSGACG00000001901 I
zic1 Gasterosteus aculeatus ENSGACG00000003678 I
zic4 Gasterosteus aculeatus ENSGACG00000003685 I
zic3 Gasterosteus aculeatus ENSGACG00000017212 I
ENSGALG00000006497 Gallus gallus ENSGALG00000006497 I
ENSGALG00000006810 Gallus gallus ENSGALG00000006810 I
ENSGALG00000006811 Gallus gallus ENSGALG00000006811 I
ZIC1 Gorilla gorilla ENSGGOG00000001101 I
ZIC2 Gorilla gorilla ENSGGOG00000006512 I
ZIC4 Gorilla gorilla ENSGGOG00000008924 I
ZIC3 Gorilla gorilla ENSGGOG00000011914 I
ENSGMOG00000001788 Gadus morhua ENSGMOG00000001788 I
ENSGMOG00000001798 Gadus morhua ENSGMOG00000001798 I
ENSGMOG00000004438 Gadus morhua ENSGMOG00000004438 I
ENSGMOG00000019585 Gadus morhua ENSGMOG00000019585 I
ENSLACG00000008525 Latimeria chalumnae ENSLACG00000008525 I
ENSLACG00000014597 Latimeria chalumnae ENSLACG00000014597 I
ZIC3 Loxodonta africana ENSLAFG00000007048 I
ZIC2 Loxodonta africana ENSLAFG00000008431 I
ZIC1 Loxodonta africana ENSLAFG00000030632 I
ENSLOCG00000003077 Lepisosteus oculatus ENSLOCG00000003077 I
ENSLOCG00000003087 Lepisosteus oculatus ENSLOCG00000003087 I
ENSLOCG00000007706 Lepisosteus oculatus ENSLOCG00000007706 I
ENSLOCG00000007717 Lepisosteus oculatus ENSLOCG00000007717 I
ENSLOCG00000015155 Lepisosteus oculatus ENSLOCG00000015155 I
ENSMEUG00000009632 Macropus eugenii ENSMEUG00000009632 I
ENSMEUG00000014290 Macropus eugenii ENSMEUG00000014290 I
ENSMICG00000010339 Microcebus murinus ENSMICG00000010339 I
ZIC4 Microcebus murinus ENSMICG00000014391 I
ZIC1 Microcebus murinus ENSMICG00000014401 I
ZIC2 Microcebus murinus ENSMICG00000015310 I
ZIC2 Myotis lucifugus ENSMLUG00000003412 I
ZIC3 Myotis lucifugus ENSMLUG00000011691 I
ZIC4 Macaca mulatta ENSMMUG00000004741 I
ZIC1 Macaca mulatta ENSMMUG00000004742 I
ZIC2 Macaca mulatta ENSMMUG00000014822 I
ZIC2 Monodelphis domestica ENSMODG00000007718 I
ZIC3 Monodelphis domestica ENSMODG00000014029 I
ENSMODG00000021250 Monodelphis domestica ENSMODG00000021250 I
ENSMPUG00000001786 Mustela putorius furo ENSMPUG00000001786 I
ENSMPUG00000011375 Mustela putorius furo ENSMPUG00000011375 I
ENSMPUG00000011764 Mustela putorius furo ENSMPUG00000011764 I
ENSMPUG00000011767 Mustela putorius furo ENSMPUG00000011767 I
Zic4 Mus musculus ENSMUSG00000036972 I
ENSNLEG00000002375 Nomascus leucogenys ENSNLEG00000002375 I
ENSNLEG00000002407 Nomascus leucogenys ENSNLEG00000002407 I
ENSNLEG00000003005 Nomascus leucogenys ENSNLEG00000003005 I
ENSNLEG00000007808 Nomascus leucogenys ENSNLEG00000007808 I
ZIC4 Ornithorhynchus anatinus ENSOANG00000007364 I
ENSOARG00000005434 Ovis aries ENSOARG00000005434 I
ENSOARG00000005467 Ovis aries ENSOARG00000005467 I
ENSOARG00000010774 Ovis aries ENSOARG00000010774 I
ZIC3 Oryctolagus cuniculus ENSOCUG00000009358 I
ZIC4 Oryctolagus cuniculus ENSOCUG00000010959 I
ZIC4 Otolemur garnettii ENSOGAG00000007463 I
ZIC1 Otolemur garnettii ENSOGAG00000007465 I
ZIC3 Otolemur garnettii ENSOGAG00000011700 I
ZIC2 Otolemur garnettii ENSOGAG00000025901 I
ENSONIG00000002716 Oreochromis niloticus ENSONIG00000002716 I
ENSONIG00000005875 Oreochromis niloticus ENSONIG00000005875 I
ENSONIG00000005878 Oreochromis niloticus ENSONIG00000005878 I
ENSONIG00000006788 Oreochromis niloticus ENSONIG00000006788 I
zic3 Oryzias latipes ENSORLG00000001654 I
zic1 Oryzias latipes ENSORLG00000010050 I
zic4 Oryzias latipes ENSORLG00000010055 I
zic2b Oryzias latipes ENSORLG00000011117 I
ENSPANG00000005804 Papio anubis ENSPANG00000005804 I
ENSPANG00000007601 Papio anubis ENSPANG00000007601 I
ENSPANG00000011357 Papio anubis ENSPANG00000011357 I
ENSPANG00000024745 Papio anubis ENSPANG00000024745 I
ZIC4 Procavia capensis ENSPCAG00000008210 I
ENSPFOG00000012173 Poecilia formosa ENSPFOG00000012173 I
ENSPFOG00000012982 Poecilia formosa ENSPFOG00000012982 I
ENSPFOG00000013981 Poecilia formosa ENSPFOG00000013981 I
ENSPFOG00000014007 Poecilia formosa ENSPFOG00000014007 I
ENSPPYG00000005472 Pongo abelii ENSPPYG00000005472 I
ENSPPYG00000014188 Pongo abelii ENSPPYG00000014188 I
ENSPPYG00000020775 Pongo abelii ENSPPYG00000020775 I
ENSPSIG00000004881 Pelodiscus sinensis ENSPSIG00000004881 I
ENSPSIG00000005002 Pelodiscus sinensis ENSPSIG00000005002 I
ENSPSIG00000009132 Pelodiscus sinensis ENSPSIG00000009132 I
ENSPSIG00000011896 Pelodiscus sinensis ENSPSIG00000011896 I
ZIC2 Pan troglodytes ENSPTRG00000006000 I
ZIC4 Pan troglodytes ENSPTRG00000015500 I
ZIC1 Pan troglodytes ENSPTRG00000015501 I
ZIC4 Pteropus vampyrus ENSPVAG00000003870 I
ZIC3 Pteropus vampyrus ENSPVAG00000011652 I
Zic3 Rattus norvegicus ENSRNOG00000000861 I
Zic1 Rattus norvegicus ENSRNOG00000014644 I
Zic4 Rattus norvegicus ENSRNOG00000014871 I
Zic2 Rattus norvegicus ENSRNOG00000054879 I
ZIC3 Sorex araneus ENSSARG00000012492 I
ENSSHAG00000003850 Sarcophilus harrisii ENSSHAG00000003850 I
ENSSHAG00000015091 Sarcophilus harrisii ENSSHAG00000015091 I
ZIC2 Sus scrofa ENSSSCG00000009520 I
ZIC1 Sus scrofa ENSSSCG00000011692 I
ZIC4 Sus scrofa ENSSSCG00000011693 I
ZIC3 Sus scrofa ENSSSCG00000012705 I
ENSSTOG00000000952 Ictidomys tridecemlineatus ENSSTOG00000000952 I
ENSSTOG00000015977 Ictidomys tridecemlineatus ENSSTOG00000015977 I
ENSSTOG00000023178 Ictidomys tridecemlineatus ENSSTOG00000023178 I
ENSSTOG00000024153 Ictidomys tridecemlineatus ENSSTOG00000024153 I
ZIC3 Taeniopygia guttata ENSTGUG00000002155 I
ENSTGUG00000008837 Taeniopygia guttata ENSTGUG00000008837 I
ZIC1 Taeniopygia guttata ENSTGUG00000008838 I
zic1 Tetraodon nigroviridis ENSTNIG00000012758 I
zic4 Tetraodon nigroviridis ENSTNIG00000012759 I
zic2b Tetraodon nigroviridis ENSTNIG00000014979 I
zic5 Tetraodon nigroviridis ENSTNIG00000014980 I
zic3 Tetraodon nigroviridis ENSTNIG00000016841 I
zic3 Takifugu rubripes ENSTRUG00000003550 I
zic5 Takifugu rubripes ENSTRUG00000011797 I
zic1 Takifugu rubripes ENSTRUG00000017760 I
zic4 Takifugu rubripes ENSTRUG00000017765 I
ENSTSYG00000003356 Tarsius syrichta ENSTSYG00000003356 I
ZIC2 Tursiops truncatus ENSTTRG00000002568 I
ZIC4 Tursiops truncatus ENSTTRG00000014343 I
ZIC1 Tursiops truncatus ENSTTRG00000014350 I
ENSXMAG00000009162 Xiphophorus maculatus ENSXMAG00000009162 I
ENSXMAG00000009164 Xiphophorus maculatus ENSXMAG00000009164 I
ENSXMAG00000010995 Xiphophorus maculatus ENSXMAG00000010995 I
ENSXMAG00000013404 Xiphophorus maculatus ENSXMAG00000013404 I
L798_08424 Zootermopsis nevadensis L798_08424 I
LotgiG193238 Lottia gigantea LotgiG193238 I
PHUM303860 Pediculus humanus PHUM303860 I
SMAR005380 Strigamia maritima SMAR005380 I
SPU_028583 Strongylocentrotus purpuratus SPU_028583 I
SPU_030070 Strongylocentrotus purpuratus SPU_030070 I
Aan_R004772 Calypte anna Aan_R004772 I
Aan_R005804 Calypte anna Aan_R005804 I
Aan_R013349 Calypte anna Aan_R013349 I
Afo_R000778 Aptenodytes forsteri Afo_R000778 I
Alligator_sinensis_CCG005717.1 Alligator sinensis Alligator_sinensis_CCG005717.1 I
Alligator_sinensis_CCG012204.1 Alligator sinensis Alligator_sinensis_CCG012204.1 I
Alligator_sinensis_CCG012205.1 Alligator sinensis Alligator_sinensis_CCG012205.1 I
Alligator_sinensis_CCG018453.1 Alligator sinensis Alligator_sinensis_CCG018453.1 I
Cmyd_10016552 Chelonia mydas Cmyd_10016552 I
Cmyd_10020767 Chelonia mydas Cmyd_10020767 I
ENSBTAP00000035289-D2 Bos grunniens ENSBTAP00000035289-D2 I
ENSP00000282928-D1 Bos grunniens ENSP00000282928-D1 I
ENSP00000282928 Macaca fascicularis ENSP00000282928 I
ENSP00000287538-D1 Bos grunniens ENSP00000287538-D1 I
ENSP00000287538 Macaca fascicularis ENSP00000287538 I
ENSP00000397695-D1 Bos grunniens ENSP00000397695-D1 I
ENSP00000397695 Macaca fascicularis ENSP00000397695 I
Gfo_R005436 Geospiza fortis Gfo_R005436 I
Gfo_R015355 Geospiza fortis Gfo_R015355 I
Myotis_brandtii_PCCA_10007322 Myotis brandtii Myotis_brandtii_PCCA_10007322 I
Myotis_brandtii_ZIC1_10009541 Myotis brandtii Myotis_brandtii_ZIC1_10009541 I
Myotis_brandtii_ZIC3_10005513 Myotis brandtii Myotis_brandtii_ZIC3_10005513 I
Myotis_brandtii_Zic4_10009542 Myotis brandtii Myotis_brandtii_Zic4_10009542 I
Ogr05309 Ophisaurus gracilis Ogr05309 I
Ogr15027 Ophisaurus gracilis Ogr15027 I
Ogr15030 Ophisaurus gracilis Ogr15030 I
Ogr17255 Ophisaurus gracilis Ogr17255 I
Pvit_01478 Pogona vitticeps Pvit_01478 I
Pvit_01479 Pogona vitticeps Pvit_01479 I
Pvit_14047 Pogona vitticeps Pvit_14047 I
estExt_gwp.C_400285 Branchiostoma floridae estExt_gwp.C_400285 I
zic4 Xenopus tropicalis XB-GENE-1033015 I
zic4.L Xenopus laevis XB-GENE-1033019 I
zic3 Xenopus tropicalis XB-GENE-480431 I
zic5 Xenopus tropicalis XB-GENE-480775 I
zic2.L Xenopus laevis XB-GENE-482658 I
zic2.S Xenopus laevis XB-GENE-6251643 I
zic1.S Xenopus laevis XB-GENE-864815 I
zic3.S Xenopus laevis XB-GENE-865376 I
zic5.S Xenopus laevis XB-GENE-865408 I
XP_002937379 Xenopus tropicalis XP_002937379 I