Ca_04693 (Cicer arietinum)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 Ca_04693 T324045_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_04693 Sigma 70 330 400

Links

Other Sigma 70 family TFs
Other Cicer arietinum TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.004G253700 Gossypium raimondii Gorai.004G253700 N 0.859
estExt_Genewise1.C_340313 Physcomitrella patens estExt_Genewise1.C_340313 N 0.718
mgf015824m Mimulus guttatus mgf015824m N 0.901
Aquca_013_00876 Aquilegia coerulea Aquca_013_00876 N 0.887
Bostr.25219s0090 Boechera stricta Bostr.25219s0090 N 0.887
Cagra.4395s0044 Capsella grandiflora Cagra.4395s0044 N 0.887
Carubv10008711m.g Capsella rubella Carubv10008711m.g N 0.887
Ciclev10030998m.g Citrus clementina Ciclev10030998m.g N 0.901
Eucgr.D01094 Eucalyptus grandis Eucgr.D01094 N 0.901
evm.TU.supercontig_73.29 Carica papaya evm.TU.supercontig_73.29 N 0.915
gene17946-v1.0-hybrid Fragaria vesca gene17946-v1.0-hybrid N 0.915
Cucsa.362600 Cucumis sativus Cucsa.362600 N 0.915
Gorai.007G347300 Gossypium raimondii Gorai.007G347300 N 0.901
Lus10005668.g Linum usitatissimum Lus10005668.g N 0.817
Lus10020325.g Linum usitatissimum Lus10020325.g N 0.817
MDP0000157652 Malus domestica MDP0000157652 N 0.915
orange1.1g007404m.g Citrus sinensis orange1.1g007404m.g N 0.901
SapurV1A.1189s0050 Salix purpurea SapurV1A.1189s0050 N 0.887
SapurV1A.1953s0020 Salix purpurea SapurV1A.1953s0020 N 0.901
Thhalv10007187m.g Eutrema salsugineum Thhalv10007187m.g N 0.887
PK16345.1 Cannabis sativa PK16345.1 N 0.915
chr1.CM0017.250.nc Lotus japonicus chr1.CM0017.250.nc N 0.915
POPTR_0013s06770 Populus trichocarpa POPTR_0013s06770 N 0.887
SIGB Arabidopsis thaliana AT1G08540 N 0.887
Bo5g009070 Brassica oleracea Bo5g009070 N 0.873
Bra018617 Brassica rapa Bra018617 N 0.873
Bra030732 Brassica rapa Bra030732 N 0.887
SIGB Arabidopsis lyrata fgenesh2_kg.1__869__AT1G08540.1 N 0.887
GLYMA04G00330 Glycine max GLYMA04G00330 N 0.887
GSMUA_Achr7G04860_001 Musa acuminata GSMUA_Achr7G04860_001 N 0.859
GSMUA_Achr7G17330_001 Musa acuminata GSMUA_Achr7G17330_001 N 0.859
MTR_3g118290 Medicago truncatula MTR_3g118290 N 0.986
PGSC0003DMG400031111 Solanum tuberosum PGSC0003DMG400031111 N 0.873
AMTR_s00011p00258380 Amborella trichopoda AMTR_s00011p00258380 N 0.901
POPTR_0019s06100 Populus trichocarpa POPTR_0019s06100 N 0.873
PRUPE_ppa006657mg Prunus persica PRUPE_ppa006657mg N 0.901
Solyc01g081490.2 Solanum lycopersicum Solyc01g081490.2 N 0.887
TCM_025741 Theobroma cacao TCM_025741 N 0.915
SIGB Vitis vinifera VIT_15s0024g00640 N 0.901
Cla007091 Citrullus lanatus Cla007091 N 0.915
Pm025497 Prunus mume Pm025497 N 0.901
30148.m001412 Ricinus communis 30148.m001412 N 0.915
cassava14033.valid.m1 Manihot esculenta cassava14033.valid.m1 N 0.901