PDK_20s1385451g001 (Phoenix dactylifera)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 PDK_20s1385451g001 T324298_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1385451g001 Sigma 70 216 286

Links

Other Sigma 70 family TFs
Other Phoenix dactylifera TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mgf003626m Mimulus guttatus mgf003626m N 0.732
PK06863.1 Cannabis sativa PK06863.1 N 0.789
Thhalv10013654m.g Eutrema salsugineum Thhalv10013654m.g N 0.789
SapurV1A.4644s0020 Salix purpurea SapurV1A.4644s0020 N 0.746
SapurV1A.0027s0740 Salix purpurea SapurV1A.0027s0740 N 0.746
orange1.1g046578m.g Citrus sinensis orange1.1g046578m.g N 0.746
gene29494-v1.0-hybrid Fragaria vesca gene29494-v1.0-hybrid N 0.718
evm.TU.supercontig_125.39 Carica papaya evm.TU.supercontig_125.39 N 0.761
Ciclev10033747m.g Citrus clementina Ciclev10033747m.g N 0.732
Carubv10001054m.g Capsella rubella Carubv10001054m.g N 0.789
Cagra.0596s0063 Capsella grandiflora Cagra.0596s0063 N 0.789
Bostr.2902s0107 Boechera stricta Bostr.2902s0107 N 0.789
Aquca_014_00805 Aquilegia coerulea Aquca_014_00805 N 0.803
AMTR_s00025p00248060 Amborella trichopoda AMTR_s00025p00248060 N 0.746
cassava43094.valid.m1 Manihot esculenta cassava43094.valid.m1 N 0.732
SIG4 Vitis vinifera VIT_13s0064g00190 N 0.775
Solyc01g087690.1 Solanum lycopersicum Solyc01g087690.1 N 0.732
SIG4 Arabidopsis lyrata scaffold_601382.1 N 0.703
SIG4 Populus trichocarpa POPTR_0009s06210 N 0.746
PGSC0003DMG402006783 Solanum tuberosum PGSC0003DMG402006783 N 0.732
GSMUA_Achr4G18530_001 Musa acuminata GSMUA_Achr4G18530_001 N 0.817
Bra023430 Brassica rapa Bra023430 N 0.789
Bra008807 Brassica rapa Bra008807 N 0.789
Bo9g166510 Brassica oleracea Bo9g166510 N 0.789
Bo2g011520 Brassica oleracea Bo2g011520 N 0.789
SIGD Arabidopsis thaliana AT5G13730 N 0.789