CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L893_g4508
(
Steinernema glaseri
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04542 (Sigma70_r2)
IPR007627
L893_g4508
T324322_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L893_g4508.t1
Sigma 70
70
131
MVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAIT
Links
Other
Sigma 70
family TFs
Other
Steinernema glaseri
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCUD_0001754301
Schistosoma curassoni
SCUD_0001754301
N
TTAC_0000096601
Hydatigera taeniaeformis
TTAC_0000096601
N
TRE_0000584301
Trichobilharzia regenti
TRE_0000584301
N
TASK_0000841801
Taenia asiatica
TASK_0000841801
N
T265_00456
Opisthorchis viverrini
T265_00456
N
SSLN_0001208601
Schistocephalus solidus
SSLN_0001208601
N
SPER_0001816901
Spirometra erinaceieuropaei
SPER_0001816901
N
SPER_0001498501
Spirometra erinaceieuropaei
SPER_0001498501
N
SMTD_0000846801
Schistosoma mattheei
SMTD_0000846801
N
SMRZ_0000265101
Schistosoma margrebowiei
SMRZ_0000265101
N
Smp_140980
Schistosoma mansoni
Smp_140980
N
PXEA_0003340601
Protopolystoma xenopodis
PXEA_0003340601
N
MCOS_0000303201
Mesocestoides corti
MCOS_0000303201
N
HNAJ_0000828701
Hymenolepis nana
HNAJ_0000828701
N
HmN_000106800
Hymenolepis microstoma
HmN_000106800
N
EmuJ_000802100
Echinococcus multilocularis
EmuJ_000802100
N
ECPE_0000558801
Echinostoma caproni
ECPE_0000558801
N
D915_02923
Fasciola hepatica
D915_02923
N
csin105807
Clonorchis sinensis
csin105807
N
A_05079
Schistosoma haematobium
A_05079
N