CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAD9
(
Ornithorhynchus anatinus
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03165 (MH1)
IPR003619
ENSOANG00000015497
T324787_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SMAD9
M11274_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_01
0.980
0.980
Smad9
M11290_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_02
0.980
0.980
Smad9
M11289_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_03
0.980
0.980
SMAD1
M11286_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD1_01
0.951
0.951
SMAD1
M11287_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD1_Q6
0.951
0.951
Smad5
M11288_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD5_01
0.941
0.941
Smad5
M11292_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD5_03
0.941
0.941
Mad
M06446_2.00
Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC
B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648
0.922
0.922
Mad
M08427_2.00
Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS
ChIP-chip
Mathelier et al.(2014)
MA0535.1
0.922
0.922
Mad
M09692_2.00
Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM
Misc
Kulakovskiy et al.(2009)
Mad
0.922
0.922
Mad
M11293_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$MAD_Q6
0.922
0.922
Smad3
M00192_2.00
Mus musculus
NNNNNMGMCN
NGKCKNNNNN
PBM
Badis et al.(2009)
Smad3_3805
0.706
0.706
SMAD3
M03482_2.00
Homo sapiens
YGTCTAGACA
TGTCTAGACR
SELEX
Jolma et al.(2013)
SMAD3_1
0.706
0.706
SMAD3
M09380_2.00
Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN
Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B
0.706
0.706
Smad3
M09384_2.00
Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN
Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B
0.706
0.706
Smad3
M09637_2.00
Mus musculus
BYAGMCWN
NWGKCTRV
Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673
0.706
0.706
SMAD3
M11283_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6_01
0.706
0.706
SMAD3
M11284_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6_02
0.706
0.706
SMAD3
M11285_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6
0.706
0.706
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000024401
SMAD
34
135
AEKAVDSLVKKLKKKKGAMEELERALSCPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLEGCEFPFGSKQKEVCINPYHYRRVE
Links
Other
SMAD
family TFs
Other
Ornithorhynchus anatinus
TFs
462 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Mad
Drosophila melanogaster
FBgn0011648
D
0.922
GE14935
Drosophila yakuba
FBgn0232525
I
0.922
TTRE_0000645601
Trichuris trichiura
TTRE_0000645601
I
0.853
NBR_0000522801
Nippostrongylus brasiliensis
NBR_0000522801
I
0.720
D918_06928
Trichuris suis
D918_06928
I
0.853
MDOA015236
Musca domestica
MDOA015236
I
0.912
MDOA012257
Musca domestica
MDOA012257
I
0.912
Myotis_brandtii_SMAD9_10010468
Myotis brandtii
Myotis_brandtii_SMAD9_10010468
I
0.971
RPRC008357
Rhodnius prolixus
RPRC008357
I
0.882
L798_03803
Zootermopsis nevadensis
L798_03803
I
0.902
HelroG186716
Helobdella robusta
HelroG186716
I
0.873
GA28973
Drosophila pseudoobscura
FBgn0250331
I
0.922
ENSAMXG00000016040
Astyanax mexicanus
ENSAMXG00000016040
I
0.922
GK18268
Drosophila willistoni
FBgn0220267
I
0.922
GJ19553
Drosophila virilis
FBgn0206695
I
0.922
SMAD9
Procavia capensis
ENSPCAG00000002604
I
0.971
ENSAPLG00000003593
Anas platyrhynchos
ENSAPLG00000003593
I
0.912
ENSLACG00000011178
Latimeria chalumnae
ENSLACG00000011178
I
0.951
SMAD9
Myotis lucifugus
ENSMLUG00000006399
I
0.971
SMAD5
Ornithorhynchus anatinus
ENSOANG00000009906
I
0.941
GD22774
Drosophila simulans
FBgn0194168
I
0.922
ENSPMAG00000009833
Petromyzon marinus
ENSPMAG00000009833
I
0.951
SMAD1
Vicugna pacos
ENSVPAG00000003340
I
0.833
GF20577
Drosophila ananassae
FBgn0097583
I
0.922
GG24457
Drosophila erecta
FBgn0116589
I
0.922
GH10284
Drosophila grimshawi
FBgn0117765
I
0.922
GI17981
Drosophila mojavensis
FBgn0140721
I
0.922
GL26531
Drosophila persimilis
FBgn0164113
I
0.922
GM18164
Drosophila sechellia
FBgn0173071
I
0.922
Ppa-sma-2
Pristionchus pacificus
PPA15247
N
Minc06478
Meloidogyne incognita
Minc06478
N
ANCCAN_07722
Ancylostoma caninum
ANCCAN_07722
N
ANCDUO_02619
Ancylostoma duodenale
ANCDUO_02619
N
DME_0000390001
Dracunculus medinensis
DME_0000390001
N
L892_g4529
Steinernema scapterisci
L892_g4529
N
maker-nMf.1.1.scaf00076-augustus-gene-0.21
Meloidogyne floridensis
maker-nMf.1.1.scaf00076-augustus-gene-0.21
N
NECAME_19535
Necator americanus
NECAME_19535
N