GPLIN_000764400 (Globodera pallida)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 GPLIN_000764400 T325683_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sma-4
M02484_2.00 		Caenorhabditis elegans
NNCCAGACANN
NNTGTCTGGNN		 PBM
Weirauch et al.(2014)
pTH8996 		0.782 0.782
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000764400 SMAD 838 953

Links

Other SMAD family TFs
Other Globodera pallida TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
sma-4 Caenorhabditis elegans WBGene00004858 D 0.782
nOo.2.0.1.g06266 Onchocerca ochengi nOo.2.0.1.g06266 I 0.782
HCOI02014300 Haemonchus contortus HCOI02014300 I 0.772
HPBE_0002536701 Heligmosomoides bakeri HPBE_0002536701 I 0.782
L596_g26024 Steinernema carpocapsae L596_g26024 I 0.772
L889_g22387 Steinernema feltiae L889_g22387 I 0.792
L892_g4495 Steinernema scapterisci L892_g4495 I 0.772
L893_g15056 Steinernema glaseri L893_g15056 I 0.782
maker-nMf.1.1.scaf05118-snap-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf05118-snap-gene-0.7 I 0.772
nAv.1.0.1.g08553 Acanthocheilonema viteae nAv.1.0.1.g08553 I 0.782
NBR_0001377901 Nippostrongylus brasiliensis NBR_0001377901 I 0.782
nDi.2.2.2.g06233 Dirofilaria immitis nDi.2.2.2.g06233 I 0.772
nLs.2.1.2.g01829 Litomosoides sigmodontis nLs.2.1.2.g01829 I 0.792
HCOI01928500 Haemonchus contortus HCOI01928500 I 0.772
OFLC_0000505301 Onchocerca flexuosa OFLC_0000505301 I 0.782
PTRK_0001020700 Parastrongyloides trichosuri PTRK_0001020700 I 0.723
RSKR_0000114900 Rhabditophanes kr3021 RSKR_0000114900 I 0.752
scaffold21-EXSNAP2012.60 Pristionchus exspectatus scaffold21-EXSNAP2012.60 I 0.762
SPAL_0001099400 Strongyloides papillosus SPAL_0001099400 I 0.723
SSTP_0000769000 Strongyloides stercoralis SSTP_0000769000 I 0.743
SVE_0858500 Strongyloides venezuelensis SVE_0858500 I 0.723
TCLT_0000412001 Thelazia callipaeda TCLT_0000412001 I 0.762
TELCIR_06960 Teladorsagia circumcincta TELCIR_06960 I 0.772
ALUE_0001111401 Ascaris lumbricoides ALUE_0001111401 I 0.792
Bm5359 Brugia malayi Bm5359 I 0.782
CBG09090 Caenorhabditis briggsae CBG09090 I 0.792
CBN31444 Caenorhabditis brenneri CBN31444 I 0.792
CJA09693 Caenorhabditis japonica CJA09693 I 0.792
CRE04707 Caenorhabditis remanei CRE04707 I 0.792
LOAG_05337 Loa loa LOAG_05337 I 0.782
Ppa-sma-4 Pristionchus pacificus PPA17857 I 0.762
WBGene00245700 Onchocerca volvulus WBGene00245700 I 0.782
Minc06316 Meloidogyne incognita Minc06316 I 0.802
Minc10272 Meloidogyne incognita Minc10272 I 0.802
WUBG_08631 Wuchereria bancrofti WUBG_08631 I 0.792
ANCDUO_13021 Ancylostoma duodenale ANCDUO_13021 I 0.792
ASIM_0001219601 Anisakis simplex ASIM_0001219601 I 0.782
ASU_10605 Ascaris suum ASU_10605 I 0.792
BTMF_0000952301 Brugia timori BTMF_0000952301 I 0.782
BXY_1538500 Bursaphelenchus xylophilus BXY_1538500 I 0.792
CGOC_0000897101 Cylicostephanus goldi CGOC_0000897101 I 0.772
DICVIV_05422 Dictyocaulus viviparus DICVIV_05422 I 0.782
EVEC_0000562301 Enterobius vermicularis EVEC_0000562301 I 0.792
GPUH_0001294301 Gongylonema pulchrum GPUH_0001294301 I 0.752