Ppa-sma-4 (Pristionchus pacificus)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 PPA17857 T325179_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sma-4
M02484_2.00 		Caenorhabditis elegans
NNCCAGACANN
NNTGTCTGGNN		 PBM
Weirauch et al.(2014)
pTH8996 		0.822 0.822
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA17857 SMAD 225 325

Links

Other SMAD family TFs
Other Pristionchus pacificus TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold21-EXSNAP2012.60 Pristionchus exspectatus scaffold21-EXSNAP2012.60 I 1.000
ALUE_0001111401 Ascaris lumbricoides ALUE_0001111401 I 0.871
WUBG_08631 Wuchereria bancrofti WUBG_08631 I 0.871
ASU_10605 Ascaris suum ASU_10605 I 0.871
Bm5359 Brugia malayi Bm5359 I 0.871
BTMF_0000952301 Brugia timori BTMF_0000952301 I 0.871
LOAG_05337 Loa loa LOAG_05337 I 0.861
ASIM_0001219601 Anisakis simplex ASIM_0001219601 I 0.861
nAv.1.0.1.g08553 Acanthocheilonema viteae nAv.1.0.1.g08553 I 0.851
EVEC_0000562301 Enterobius vermicularis EVEC_0000562301 I 0.851
nDi.2.2.2.g06233 Dirofilaria immitis nDi.2.2.2.g06233 I 0.851
nOo.2.0.1.g06266 Onchocerca ochengi nOo.2.0.1.g06266 I 0.851
OFLC_0000505301 Onchocerca flexuosa OFLC_0000505301 I 0.851
nLs.2.1.2.g01829 Litomosoides sigmodontis nLs.2.1.2.g01829 I 0.851
WBGene00245700 Onchocerca volvulus WBGene00245700 I 0.851
TCLT_0000412001 Thelazia callipaeda TCLT_0000412001 I 0.842
L893_g15056 Steinernema glaseri L893_g15056 I 0.842
ANCDUO_13021 Ancylostoma duodenale ANCDUO_13021 I 0.832
L889_g22387 Steinernema feltiae L889_g22387 I 0.832
HCOI02014300 Haemonchus contortus HCOI02014300 I 0.822
HCOI01928500 Haemonchus contortus HCOI01928500 I 0.822
NBR_0001377901 Nippostrongylus brasiliensis NBR_0001377901 I 0.822
TELCIR_06960 Teladorsagia circumcincta TELCIR_06960 I 0.822
HPBE_0002536701 Heligmosomoides bakeri HPBE_0002536701 I 0.822
GPUH_0001294301 Gongylonema pulchrum GPUH_0001294301 I 0.822
CRE04707 Caenorhabditis remanei CRE04707 I 0.822
sma-4 Caenorhabditis elegans WBGene00004858 D 0.822
CGOC_0000897101 Cylicostephanus goldi CGOC_0000897101 I 0.822
CJA09693 Caenorhabditis japonica CJA09693 I 0.822
DICVIV_05422 Dictyocaulus viviparus DICVIV_05422 I 0.822
SSTP_0000769000 Strongyloides stercoralis SSTP_0000769000 I 0.812
RSKR_0000114900 Rhabditophanes kr3021 RSKR_0000114900 I 0.812
L892_g4495 Steinernema scapterisci L892_g4495 I 0.812
CBG09090 Caenorhabditis briggsae CBG09090 I 0.812
L596_g26024 Steinernema carpocapsae L596_g26024 I 0.812
Bm11291 Brugia malayi Bm11291 I 0.807
CBN31444 Caenorhabditis brenneri CBN31444 I 0.802
SPAL_0001099400 Strongyloides papillosus SPAL_0001099400 I 0.802
SVE_0858500 Strongyloides venezuelensis SVE_0858500 I 0.802
ACAC_0000977101 Angiostrongylus cantonensis ACAC_0000977101 I 0.795
PTRK_0001020700 Parastrongyloides trichosuri PTRK_0001020700 I 0.782
GPLIN_000764400 Globodera pallida GPLIN_000764400 I 0.762
BXY_1538500 Bursaphelenchus xylophilus BXY_1538500 I 0.743
Hba_14016 Heterorhabditis bacteriophora Hba_14016 I 0.740
HCOI00557700 Haemonchus contortus HCOI00557700 N 0.739
TELCIR_11814 Teladorsagia circumcincta TELCIR_11814 I 0.736
Minc10272 Meloidogyne incognita Minc10272 I 0.733
Minc06316 Meloidogyne incognita Minc06316 I 0.733
maker-nMf.1.1.scaf05118-snap-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf05118-snap-gene-0.7 I 0.723
ANCCAN_26651 Ancylostoma caninum ANCCAN_26651 I 0.720
ASU_13433 Ascaris suum ASU_13433 I 0.703
ASIM_0001604001 Anisakis simplex ASIM_0001604001 I 0.703
nDi.2.2.2.g01429 Dirofilaria immitis nDi.2.2.2.g01429 I 0.703