CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Hba_14016
(
Heterorhabditis bacteriophora
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03165 (MH1)
IPR003619
Hba_14016
T325695_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sma-4
M02484_2.00
Caenorhabditis elegans
NNCCAGACANN
NNTGTCTGGNN
PBM
Weirauch et al.(2014)
pTH8996
0.740
0.740
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Hba_14016
SMAD
121
220
VRKAIDSLVRKLKDKRVELDALITAITSSGKQPTICVTIQRSLDGRLQVAGRKGVPHVVYARIWRWPNVSKNELVLSMCVIPMDHQDFICVNPYHYERVV
Links
Other
SMAD
family TFs
Other
Heterorhabditis bacteriophora
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI02014300
Haemonchus contortus
HCOI02014300
I
0.780
CGOC_0000897101
Cylicostephanus goldi
CGOC_0000897101
I
0.780
TELCIR_06960
Teladorsagia circumcincta
TELCIR_06960
I
0.780
HCOI01928500
Haemonchus contortus
HCOI01928500
I
0.780
HPBE_0002536701
Heligmosomoides bakeri
HPBE_0002536701
I
0.772
NBR_0001377901
Nippostrongylus brasiliensis
NBR_0001377901
I
0.772
DICVIV_05422
Dictyocaulus viviparus
DICVIV_05422
I
0.772
ANCDUO_13021
Ancylostoma duodenale
ANCDUO_13021
I
0.770
WUBG_08631
Wuchereria bancrofti
WUBG_08631
I
0.740
Bm5359
Brugia malayi
Bm5359
I
0.740
CJA09693
Caenorhabditis japonica
CJA09693
I
0.740
Ppa-sma-4
Pristionchus pacificus
PPA17857
I
0.740
CBN31444
Caenorhabditis brenneri
CBN31444
I
0.740
scaffold21-EXSNAP2012.60
Pristionchus exspectatus
scaffold21-EXSNAP2012.60
I
0.740
ASU_10605
Ascaris suum
ASU_10605
I
0.740
TCLT_0000412001
Thelazia callipaeda
TCLT_0000412001
I
0.740
sma-4
Caenorhabditis elegans
WBGene00004858
D
0.740
ALUE_0001111401
Ascaris lumbricoides
ALUE_0001111401
I
0.740
nLs.2.1.2.g01829
Litomosoides sigmodontis
nLs.2.1.2.g01829
I
0.740
BTMF_0000952301
Brugia timori
BTMF_0000952301
I
0.740
TELCIR_11814
Teladorsagia circumcincta
TELCIR_11814
I
0.736
CRE04707
Caenorhabditis remanei
CRE04707
I
0.733
ASIM_0001219601
Anisakis simplex
ASIM_0001219601
I
0.733
nDi.2.2.2.g06233
Dirofilaria immitis
nDi.2.2.2.g06233
I
0.730
nOo.2.0.1.g06266
Onchocerca ochengi
nOo.2.0.1.g06266
I
0.730
OFLC_0000505301
Onchocerca flexuosa
OFLC_0000505301
I
0.730
CBG09090
Caenorhabditis briggsae
CBG09090
I
0.730
nAv.1.0.1.g08553
Acanthocheilonema viteae
nAv.1.0.1.g08553
I
0.730
WBGene00245700
Onchocerca volvulus
WBGene00245700
I
0.730
L893_g15056
Steinernema glaseri
L893_g15056
I
0.730
LOAG_05337
Loa loa
LOAG_05337
I
0.723
L889_g22387
Steinernema feltiae
L889_g22387
I
0.723
L892_g4495
Steinernema scapterisci
L892_g4495
I
0.720
L596_g26024
Steinernema carpocapsae
L596_g26024
I
0.720
EVEC_0000562301
Enterobius vermicularis
EVEC_0000562301
I
0.713
RSKR_0000114900
Rhabditophanes kr3021
RSKR_0000114900
I
0.710