CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIBMGA004367
(
Bombyx mori
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
BGIBMGA004367
T326563_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Sox15
M03973_2.00
Drosophila melanogaster
WYTGTTCGGTD
HACCGAACARW
SELEX
Nitta et al.(2015)
Sox15_1
0.417
0.897
Sox15
M03974_2.00
Drosophila melanogaster
VACAATDNCATTGTN
NACAATGNHATTGTB
SELEX
Nitta et al.(2015)
Sox15_2
0.417
0.897
Sox15
M06450_2.00
Drosophila melanogaster
RWACAATR
YATTGTWY
B1H
Zhu et al.(2011)
Sox15_SANGER_5_FBgn0005613
0.417
0.897
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIBMGA004367-TA
Sox
95
133
IRRPMNAFMVWAKVERKKLADENPDLHNADLSKMLGEYF
Links
Other
Sox
family TFs
Other
Bombyx mori
TFs
194 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CpipJ_CPIJ004100
Culex pipiens
CpipJ_CPIJ004100
N
CPIJ004100
Culex quinquefasciatus
CPIJ004100
N
ENSAMXG00000007793
Astyanax mexicanus
ENSAMXG00000007793
N
WBGene00243066
Onchocerca volvulus
WBGene00243066
N
LDEC000070
Leptinotarsa decemlineata
LDEC000070
N
ASTEI02406
Anopheles stephensi
ASTEI02406
N
ACOC_0001031201
Angiostrongylus costaricensis
ACOC_0001031201
N
D917_01153
Trichinella nativa
D917_01153
N
nOo.2.0.1.g08801
Onchocerca ochengi
nOo.2.0.1.g08801
N
TRE_0000318601
Trichobilharzia regenti
TRE_0000318601
N