CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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D917_01153
(
Trichinella nativa
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
D917_01153
T233473_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D917_01153
Homeodomain
16
64
RRYRTAFTREQICRLESEFARENYVSRPRRCELSTVLNLPESTIKFIFS
Links
Other
Homeodomain
family TFs
Other
Trichinella nativa
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CPIJ004100
Culex quinquefasciatus
CPIJ004100
N
0.709
CpipJ_CPIJ004100
Culex pipiens
CpipJ_CPIJ004100
N
0.709
LDEC000070
Leptinotarsa decemlineata
LDEC000070
N
0.657
ASTEI02406
Anopheles stephensi
ASTEI02406
N
0.651
maker-nMf.1.1.scaf02133-snap-gene-0.11
Meloidogyne floridensis
maker-nMf.1.1.scaf02133-snap-gene-0.11
N
0.645
WBGene00243066
Onchocerca volvulus
WBGene00243066
N
0.641
TRE_0000318601
Trichobilharzia regenti
TRE_0000318601
N
0.641
nOo.2.0.1.g08801
Onchocerca ochengi
nOo.2.0.1.g08801
N
0.641
HPBE_0001037601
Heligmosomoides bakeri
HPBE_0001037601
N
0.618
WUBG_13692
Wuchereria bancrofti
WUBG_13692
N
0.609
GPUH_0001490001
Gongylonema pulchrum
GPUH_0001490001
N
0.601