CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0000318601
(
Trichobilharzia regenti
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
TRE_0000318601
T236979_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0000318601-mRNA-1
Homeodomain
197
245
RRQRTHFTSQQLQELEATFARNRYPDMNLREEIATWTDLSESRVRVSYS
Links
Other
Homeodomain
family TFs
Other
Trichobilharzia regenti
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LDEC000070
Leptinotarsa decemlineata
LDEC000070
N
0.758
ASTEI02406
Anopheles stephensi
ASTEI02406
N
0.758
WBGene00243066
Onchocerca volvulus
WBGene00243066
N
0.707
nOo.2.0.1.g08801
Onchocerca ochengi
nOo.2.0.1.g08801
N
0.707
CpipJ_CPIJ004100
Culex pipiens
CpipJ_CPIJ004100
N
0.689
CPIJ004100
Culex quinquefasciatus
CPIJ004100
N
0.689
ENSAMXG00000007793
Astyanax mexicanus
ENSAMXG00000007793
N
0.649
ACOC_0001031201
Angiostrongylus costaricensis
ACOC_0001031201
N
0.648
D917_01153
Trichinella nativa
D917_01153
N
0.641
SCUD_0001059601
Schistosoma curassoni
SCUD_0001059601
I
0.632
SMRZ_0001120301
Schistosoma margrebowiei
SMRZ_0001120301
I
0.632
SMTD_0002114601
Schistosoma mattheei
SMTD_0002114601
I
0.632
scaffold1449-EXSNAP2012.6
Pristionchus exspectatus
scaffold1449-EXSNAP2012.6
N
0.615
HPBE_0001037601
Heligmosomoides bakeri
HPBE_0001037601
N
0.611
maker-nMf.1.1.scaf02133-snap-gene-0.11
Meloidogyne floridensis
maker-nMf.1.1.scaf02133-snap-gene-0.11
N
0.601
YQE_01261
Dendroctonus ponderosae
YQE_01261
I
0.599