CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HBP1
(
Otolemur garnettii
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSOGAG00000013102
T328650_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hbp1
M00194_2.00
Mus musculus
NNNDDNNN
NNNHHNNN
PBM
Badis et al.(2009)
Hbp1_2241
0.741
1.000
HBP1
M11299_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HBP1_Q2
0.741
1.000
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000011739
Sox
434
501
CKRPMNAFMLFAKKYRVEYTQMYPGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPDC
Links
Other
Sox
family TFs
Other
Otolemur garnettii
TFs
111 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RBAK
Homo sapiens
ENSG00000146587
D
ENSMPUG00000016607
Mustela putorius furo
ENSMPUG00000016607
I
ENSP00000275423
Macaca fascicularis
ENSP00000275423
I
RBAK
Sus scrofa
ENSSSCG00000008668
I
Rbak
Rattus norvegicus
ENSRNOG00000001099
I
RBAK
Pan troglodytes
ENSPTRG00000018880
I
ENSPPYG00000017329
Pongo abelii
ENSPPYG00000017329
I
RBAK
Procavia capensis
ENSPCAG00000015859
I
ENSPANG00000015671
Papio anubis
ENSPANG00000015671
I
ENSOARG00000002641
Ovis aries
ENSOARG00000002641
I
ENSNLEG00000015490
Nomascus leucogenys
ENSNLEG00000015490
I
Rbak
Mus musculus
ENSMUSG00000061898
I
RBAK
Bos taurus
ENSBTAG00000010291
I
ENSMMUG00000006521
Macaca mulatta
ENSMMUG00000006521
I
RBAK
Myotis lucifugus
ENSMLUG00000004409
I
RBAK
Loxodonta africana
ENSLAFG00000008833
I
RBAK
Gorilla gorilla
ENSGGOG00000008465
I
RBAK
Erinaceus europaeus
ENSEEUG00000007766
I
RBAK
Equus caballus
ENSECAG00000009724
I
ENSCSAG00000017653
Chlorocebus sabaeus
ENSCSAG00000017653
I
RBAK
Callithrix jacchus
ENSCJAG00000021500
I
RBAK
Canis familiaris
ENSCAFG00000029211
I