RBAK (Procavia capensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPCAG00000015859 T105993_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBAK
M07595_2.00 		Homo sapiens
BSYYBYTYSTYHCBN
NVGDRASRARVRRSV		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
RBAK.RCADE.ReprocessedData 		0.796 0.951
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000014840 C2H2 ZF 317 339
ENSPCAP00000014840 C2H2 ZF 345 367
ENSPCAP00000014840 C2H2 ZF 373 395
ENSPCAP00000014840 C2H2 ZF 401 423
ENSPCAP00000014840 C2H2 ZF 429 451
ENSPCAP00000014840 C2H2 ZF 457 479
ENSPCAP00000014840 C2H2 ZF 485 507
ENSPCAP00000014840 C2H2 ZF 513 535
ENSPCAP00000014840 C2H2 ZF 567 588
ENSPCAP00000014840 C2H2 ZF 595 617
ENSPCAP00000014840 C2H2 ZF 623 645
ENSPCAP00000014840 C2H2 ZF 651 673
ENSPCAP00000014840 C2H2 ZF 679 701
ENSPCAP00000014840 C2H2 ZF 707 729
ENSPCAP00000014840 C2H2 ZF 735 757

Links

Other C2H2 ZF family TFs
Other Procavia capensis TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RBAK Callithrix jacchus ENSCJAG00000021500 I 0.798
ENSCSAG00000017653 Chlorocebus sabaeus ENSCSAG00000017653 I 0.796
RBAK Homo sapiens ENSG00000146587 D 0.796
RBAK Gorilla gorilla ENSGGOG00000008465 I 0.796
ENSMMUG00000006521 Macaca mulatta ENSMMUG00000006521 I 0.796
ENSNLEG00000015490 Nomascus leucogenys ENSNLEG00000015490 I 0.796
ENSPANG00000015671 Papio anubis ENSPANG00000015671 I 0.796
ENSPPYG00000017329 Pongo abelii ENSPPYG00000017329 I 0.796
RBAK Pan troglodytes ENSPTRG00000018880 I 0.796
ENSP00000275423 Macaca fascicularis ENSP00000275423 I 0.796
ENSOARG00000002641 Ovis aries ENSOARG00000002641 I 0.791
RBAK Bos taurus ENSBTAG00000010291 I 0.790
RBAK Myotis lucifugus ENSMLUG00000004409 I 0.788
ENSMPUG00000016607 Mustela putorius furo ENSMPUG00000016607 I 0.784
RBAK Equus caballus ENSECAG00000009724 I 0.772
RBAK Canis familiaris ENSCAFG00000029211 I 0.770