ENSSSCG00000023554 (Sus scrofa)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSSSCG00000023554 T329148_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000026923 Sox 29 97

Links

Other Sox family TFs
Other Sus scrofa TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATBZIP42 Arabidopsis thaliana AT3G30530 D
OS02G0266800 Oryza sativa OS02G0266800 D
OS02G0728001 Oryza sativa OS02G0728001 D
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I
BGIOSGA006734 Oryza indica BGIOSGA006734 I
BGIOSGA007649 Oryza indica BGIOSGA007649 I
BGIOSGA008968 Oryza indica BGIOSGA008968 I
Bo2g012800 Brassica oleracea Bo2g012800 I
Bo3g010620 Brassica oleracea Bo3g010620 I
Bo3g010750 Brassica oleracea Bo3g010750 I
Bo9g163740 Brassica oleracea Bo9g163740 I
Bra006324 Brassica rapa Bra006324 I
Bra008670 Brassica rapa Bra008670 I
Bra023540 Brassica rapa Bra023540 I
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I
GLYMA01G09510 Glycine max GLYMA01G09510 I
GLYMA01G40370 Glycine max GLYMA01G40370 I
GLYMA02G13960 Glycine max GLYMA02G13960 I
GLYMA03G40730 Glycine max GLYMA03G40730 I
GLYMA04G01210 Glycine max GLYMA04G01210 I
GLYMA06G01240 Glycine max GLYMA06G01240 I
GLYMA11G04920 Glycine max GLYMA11G04920 I
GLYMA11G12240 Glycine max GLYMA11G12240 I
GLYMA12G04440 Glycine max GLYMA12G04440 I
GLYMA17G17100 Glycine max GLYMA17G17100 I
GLYMA19G05050 Glycine max GLYMA19G05050 I
GLYMA19G43420 Glycine max GLYMA19G43420 I
GRMZM2G020799 Zea mays GRMZM2G020799 I
GRMZM2G098904 Zea mays GRMZM2G098904 I
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I
GSMUA_Achr1G25340_001 Musa acuminata GSMUA_Achr1G25340_001 I
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I
GSMUA_Achr5G05350_001 Musa acuminata GSMUA_Achr5G05350_001 I
GSMUA_Achr7G07650_001 Musa acuminata GSMUA_Achr7G07650_001 I
GSMUA_Achr9G14690_001 Musa acuminata GSMUA_Achr9G14690_001 I
LPERR02G04950 Leersia perrieri LPERR02G04950 I
LPERR06G19690 Leersia perrieri LPERR06G19690 I
LPERR12G15130 Leersia perrieri LPERR12G15130 I
MTR_4g097440 Medicago truncatula MTR_4g097440 I
MTR_5g015090 Medicago truncatula MTR_5g015090 I
MTR_7g029400 Medicago truncatula MTR_7g029400 I
MTR_8g015250 Medicago truncatula MTR_8g015250 I
OB06G31430 Oryza brachyantha OB06G31430 I
OBART02G05680 Oryza barthii OBART02G05680 I
OBART02G11580 Oryza barthii OBART02G11580 I
OBART02G31030 Oryza barthii OBART02G31030 I
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I
OGLUM02G31690 Oryza glumaepatula OGLUM02G31690 I
OLONG_004835 Oryza longistaminata OLONG_004835 I
OMERI02G06470 Oryza meridionalis OMERI02G06470 I
OMERI02G12230 Oryza meridionalis OMERI02G12230 I
OMERI02G29910 Oryza meridionalis OMERI02G29910 I
ONIVA02G06040 Oryza nivara ONIVA02G06040 I
ONIVA02G12920 Oryza nivara ONIVA02G12920 I
ONIVA02G34180 Oryza nivara ONIVA02G34180 I
OPUNC02G10230 Oryza punctata OPUNC02G10230 I
OPUNC02G28720 Oryza punctata OPUNC02G28720 I
OPUNC12G16360 Oryza punctata OPUNC12G16360 I
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I
ORGLA02G0265300 Oryza glaberrima ORGLA02G0265300 I
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I
ORUFI02G32700 Oryza rufipogon ORUFI02G32700 I
OS02G0175100 Oryza sativa OS02G0175100 I
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I
PGSC0003DMG400007523 Solanum tuberosum PGSC0003DMG400007523 I
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I
PGSC0003DMG400021431 Solanum tuberosum PGSC0003DMG400021431 I
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I
POPTR_0017s14490 Populus trichocarpa POPTR_0017s14490 I
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I
Sb04g005020 Sorghum bicolor Sb04g005020 I
Si017778m.g Setaria italica Si017778m.g I
Si019897m.g Setaria italica Si019897m.g I
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I
Solyc02g092090.1 Solanum lycopersicum Solyc02g092090.1 I
Solyc03g046440.1 Solanum lycopersicum Solyc03g046440.1 I
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I
TCM_000835 Theobroma cacao TCM_000835 I
TCM_026349 Theobroma cacao TCM_026349 I
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I
VIT_05s0077g01140 Vitis vinifera VIT_05s0077g01140 I
BZO2H3 Vitis vinifera VIT_14s0030g02200 I
Ca_09362 Cicer arietinum Ca_09362 I
Ca_17416 Cicer arietinum Ca_17416 I
Cla005975 Citrullus lanatus Cla005975 I
Cla008074 Citrullus lanatus Cla008074 I
Cla015037 Citrullus lanatus Cla015037 I
Cla016748 Citrullus lanatus Cla016748 I
Cla016841 Citrullus lanatus Cla016841 I
Cla020641 Citrullus lanatus Cla020641 I
Pm002353 Prunus mume Pm002353 I
Pm015434 Prunus mume Pm015434 I
29598.m000468 Ricinus communis 29598.m000468 I
30131.m007078 Ricinus communis 30131.m007078 I
30138.m003866 Ricinus communis 30138.m003866 I
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I
cassava32522.m1 Manihot esculenta cassava32522.m1 I
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I
cassava40461.m1 Manihot esculenta cassava40461.m1 I
cassava41140.m1 Manihot esculenta cassava41140.m1 I
cassava46237.m1 Manihot esculenta cassava46237.m1 I
cassava9577.m1 Manihot esculenta cassava9577.m1 I
Cucsa.109420 Cucumis sativus Cucsa.109420 I
Cucsa.174700 Cucumis sativus Cucsa.174700 I
Cucsa.238410 Cucumis sativus Cucsa.238410 I
Cucsa.284240 Cucumis sativus Cucsa.284240 I
Cucsa.388800 Cucumis sativus Cucsa.388800 I
estExt_fgenesh1_pg.C_2060068 Physcomitrella patens estExt_fgenesh1_pg.C_2060068 I
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I
mgf003466m Mimulus guttatus mgf003466m I
mgf007535m Mimulus guttatus mgf007535m I
mgf009803m Mimulus guttatus mgf009803m I
mgf012838m Mimulus guttatus mgf012838m I
mgf013074m Mimulus guttatus mgf013074m I
mgf017392m Mimulus guttatus mgf017392m I
mgf018581m Mimulus guttatus mgf018581m I
mgf021986m Mimulus guttatus mgf021986m I
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I
Carubv10002068m.g Capsella rubella Carubv10002068m.g I
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I
Ciclev10013334m.g Citrus clementina Ciclev10013334m.g I
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I
evm.TU.supercontig_129.74 Carica papaya evm.TU.supercontig_129.74 I
evm.TU.supercontig_52.101 Carica papaya evm.TU.supercontig_52.101 I
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I
Gorai.008G065300 Gossypium raimondii Gorai.008G065300 I
Gorai.008G085200 Gossypium raimondii Gorai.008G085200 I
Lus10011722.g Linum usitatissimum Lus10011722.g I
Lus10013059.g Linum usitatissimum Lus10013059.g I
Lus10029101.g Linum usitatissimum Lus10029101.g I
MDP0000183562 Malus domestica MDP0000183562 I
MDP0000205823 Malus domestica MDP0000205823 I
MDP0000239026 Malus domestica MDP0000239026 I
MDP0000738631 Malus domestica MDP0000738631 I
MDP0000863909 Malus domestica MDP0000863909 I
MDP0000891108 Malus domestica MDP0000891108 I
MDP0000891899 Malus domestica MDP0000891899 I
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I
SapurV1A.0396s0080 Salix purpurea SapurV1A.0396s0080 I
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I
PK07533.1 Cannabis sativa PK07533.1 I
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I
POPTR_0014s00790 Populus trichocarpa POPTR_0014s00790 N
VIT_18s0001g13040 Vitis vinifera VIT_18s0001g13040 N
Ca_15971 Cicer arietinum Ca_15971 N
28976.m000155 Ricinus communis 28976.m000155 N
mgf004063m Mimulus guttatus mgf004063m N
Ciclev10002731m.g Citrus clementina Ciclev10002731m.g N
Eucgr.G01645 Eucalyptus grandis Eucgr.G01645 N
Eucgr.L01789 Eucalyptus grandis Eucgr.L01789 N
evm.TU.supercontig_53.3 Carica papaya evm.TU.supercontig_53.3 N
MDP0000261154 Malus domestica MDP0000261154 N
orange1.1g041765m.g Citrus sinensis orange1.1g041765m.g N
SapurV1A.0235s0220 Salix purpurea SapurV1A.0235s0220 N
SapurV1A.0608s0130 Salix purpurea SapurV1A.0608s0130 N
PK01815.1 Cannabis sativa PK01815.1 N