GSMUA_AchrUn_randomG05290_001 (Musa acuminata)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GSMUA_AchrUn_randomG05290_001 T330382_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMG-1
M02720_2.00 		Pisum sativum
STYGTDHTY
RADHACRAS		 SELEX
Mathelier et al.(2014)
MA0044.1 		0.451 0.536
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_AchrUn_randomP05290_001 Sox 106 175

Links

Other Sox family TFs
Other Musa acuminata TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AARA006496 Anopheles arabiensis AARA006496 N
AMAM022417 Anopheles maculatus AMAM022417 N
AFUN001272 Anopheles funestus AFUN001272 N
AFAF001135 Anopheles farauti AFAF001135 N
AEPI009418 Anopheles epiroticus AEPI009418 N
ADIR010123 Anopheles dirus ADIR010123 N
ACUA025632 Anopheles culicifacies ACUA025632 N
ACOM033657 Anopheles coluzzii ACOM033657 N
ACHR006211 Anopheles christyi ACHR006211 N
AATE004647 Anopheles atroparvus AATE004647 N
AMEC012325 Anopheles melas AMEC012325 N
AALB009551 Anopheles albimanus AALB009551 N
Minc06622 Meloidogyne incognita Minc06622 N
LDEC007066 Leptinotarsa decemlineata LDEC007066 N
LCUP007789 Lucilia cuprina LCUP007789 N
Hsal_02676--XP_625055.2_APIME Harpegnathos saltator Hsal_02676--XP_625055.2_APIME N
Cflo_01038--XP_625055.2_APIME Camponotus floridanus Cflo_01038--XP_625055.2_APIME N
YQE_05481 Dendroctonus ponderosae YQE_05481 N
pbrm-1 Caenorhabditis elegans WBGene00007042 N
tetur31g01070 Tetranychus urticae tetur31g01070 N
L889_g13125 Steinernema feltiae L889_g13125 N
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N
SSTP_0001127200 Strongyloides stercoralis SSTP_0001127200 N
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N
scaffold517-EXSNAP2012.7 Pristionchus exspectatus scaffold517-EXSNAP2012.7 N
RSKR_0000607700 Rhabditophanes kr3021 RSKR_0000607700 N
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N
MhA1_Contig232.frz3.gene23 Meloidogyne hapla MhA1_Contig232.frz3.gene23 N
L898_g14011 Steinernema monticolum L898_g14011 N
tetur31g00840 Tetranychus urticae tetur31g00840 N
PPAI002532 Phlebotomus papatasi PPAI002532 N
MDOA008474 Musca domestica MDOA008474 N
LLOJ004028 Lutzomyia longipalpis LLOJ004028 N
BGLB013626 Biomphalaria glabrata BGLB013626 N
ASTEI10740 Anopheles stephensi ASTEI10740 N
ASIS018375 Anopheles sinensis ASIS018375 N
AQUA001810 Anopheles quadriannulatus AQUA001810 N
AMIN002364 Anopheles minimus AMIN002364 N
AMEM003228 Anopheles merus AMEM003228 N
CBN31697 Caenorhabditis brenneri CBN31697 N
GF23180 Drosophila ananassae FBgn0100174 N
GA10956 Drosophila pseudoobscura FBgn0071012 N
polybromo Drosophila melanogaster FBgn0039227 N
ENSCING00000003572 Ciona intestinalis ENSCING00000003572 N
DAPPUDRAFT_304382 Daphnia pulex DAPPUDRAFT_304382 N
CRE14258 Caenorhabditis remanei CRE14258 N
CPIJ007271 Culex quinquefasciatus CPIJ007271 N
CJA30740 Caenorhabditis japonica CJA30740 N
CJA03316 Caenorhabditis japonica CJA03316 N
GG12321 Drosophila erecta FBgn0104611 N
CBN07735 Caenorhabditis brenneri CBN07735 N
CBG11867 Caenorhabditis briggsae CBG11867 N
BGIBMGA010711 Bombyx mori BGIBMGA010711 N
AMTR_s00023p00232620 Amborella trichopoda AMTR_s00023p00232620 N
AGAP001099 Anopheles gambiae AGAP001099 N
ADAC005840 Anopheles darlingi ADAC005840 N
ACYPI001480 Acyrthosiphon pisum ACYPI001480 N
ACEP25803 Atta cephalotes ACEP25803 N
AAEL000181 Aedes aegypti AAEL000181 N
KGM_06850 Danaus plexippus KGM_06850 N
tetur31g00660 Tetranychus urticae tetur31g00660 N
TC000618 Tribolium castaneum TC000618 N
SMAR009325 Strigamia maritima SMAR009325 N
SINV16486 Solenopsis invicta SINV16486 N
RPRC014309 Rhodnius prolixus RPRC014309 N
PHUM244090 Pediculus humanus PHUM244090 N
NEMVEDRAFT_v1g240009 Nematostella vectensis NEMVEDRAFT_v1g240009 N
MESCA007902 Megaselia scalaris MESCA007902 N
L798_12146 Zootermopsis nevadensis L798_12146 N
CpipJ_CPIJ007271 Culex pipiens CpipJ_CPIJ007271 N
ISCW005293 Ixodes scapularis ISCW005293 N
HMEL006186 Heliconius melpomene HMEL006186 N
GB42921 Apis mellifera GB42921 N
GE10775 Drosophila yakuba FBgn0228617 N
GJ23670 Drosophila virilis FBgn0210767 N
GM22062 Drosophila sechellia FBgn0176933 N
GL13862 Drosophila persimilis FBgn0151467 N
GI24041 Drosophila mojavensis FBgn0146764 N
GH18462 Drosophila grimshawi FBgn0125929 N