PAS_chr1-1_0442 (Komagataella pastoris)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PAS_chr1-1_0442 T331759_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CAY67819 Sox 125 149
CAY67819 Sox 157 205

Links

Other Sox family TFs
Other Komagataella pastoris TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Phyra72796 Phytophthora ramorum Phyra72796 D
fgenesh_scip_prom.28083.3668 Phytophthora lateralis fgenesh_scip_prom.28083.3668 I
fgenesh1_kg.C_scaffold_1000461 Phytophthora capsici fgenesh1_kg.C_scaffold_1000461 I
e_gw1.4.390.1 Phytophthora capsici e_gw1.4.390.1 I
PYU1_G004134 Pythium ultimum PYU1_G004134 I
PITG_14364 Phytophthora infestans PITG_14364 I
PITG_00513 Phytophthora infestans PITG_00513 I
Physo142552 Phytophthora sojae Physo142552 I
Physo132994 Phytophthora sojae Physo132994 I
maker-pve_contig_695-fgenesh-gene-0.3 Pythium vexans maker-pve_contig_695-fgenesh-gene-0.3 I
maker-pve_contig_182-snap-gene-0.15 Pythium vexans maker-pve_contig_182-snap-gene-0.15 I
maker-piw_contig_2979-fgenesh-gene-0.0 Pythium iwayamai maker-piw_contig_2979-fgenesh-gene-0.0 I
maker-pir_contig_1401-snap-gene-0.1 Pythium irregulare maker-pir_contig_1401-snap-gene-0.1 I
maker-pir_contig_1153-fgenesh-gene-0.2 Pythium irregulare maker-pir_contig_1153-fgenesh-gene-0.2 I
maker-par_contig_5774-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_5774-fgenesh-gene-0.0 I
maker-pag1_scaffold_4-fgenesh-gene-0.4 Pythium aphanidermatum maker-pag1_scaffold_4-fgenesh-gene-0.4 I
HpaG811872 Hyaloperonospora arabidopsidis HpaG811872 I
HpaG801016 Hyaloperonospora arabidopsidis HpaG801016 I
fgenesh_scip_prom.46568.5993 Phytophthora kernoviae fgenesh_scip_prom.46568.5993 I
fgenesh_scip_prom.46568.10732 Phytophthora kernoviae fgenesh_scip_prom.46568.10732 I
F443_20633 Phytophthora parasitica F443_20633 I
maker-piw_contig_357-snap-gene-0.7 Pythium iwayamai maker-piw_contig_357-snap-gene-0.7 N