CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PILCRDRAFT_57544
(
Piloderma croceum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PILCRDRAFT_57544
T332020_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM91985
Sox
15
86
PGRPPNAWIIYRKTKLPTLPPVAPGQSRRCQAEVSRIISKMWREEPDHVKAEYERMAEEQKALHLRMNPGYK
Links
Other
Sox
family TFs
Other
Piloderma croceum
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ba01281
Panicum virgatum
Pavir.Ba01281
I
0.000
Sb05g006275
Sorghum bicolor
Sb05g006275
I
0.000
Sb02g030340
Sorghum bicolor
Sb02g030340
I
0.000
Sb02g030330
Sorghum bicolor
Sb02g030330
I
0.000
Sb02g030320
Sorghum bicolor
Sb02g030320
I
0.000
DREB1H
Oryza sativa
OS09G0522100
I
0.000
ORUFI09G18200
Oryza rufipogon
ORUFI09G18200
I
0.000
ORGLA09G0133100
Oryza glaberrima
ORGLA09G0133100
I
0.000
Si031001m.g
Setaria italica
Si031001m.g
I
0.000
ORGLA08G0220100
Oryza glaberrima
ORGLA08G0220100
I
0.000
OPUNC09G15280
Oryza punctata
OPUNC09G15280
I
0.000
OPUNC09G15260
Oryza punctata
OPUNC09G15260
I
0.000
ONIVA09G17890
Oryza nivara
ONIVA09G17890
I
0.000
OMERI09G12480
Oryza meridionalis
OMERI09G12480
I
0.000
OGLUM09G17420
Oryza glumaepatula
OGLUM09G17420
I
0.000
Pavir.J03892
Panicum virgatum
Pavir.J03892
I
0.000
LPERR09G12950
Leersia perrieri
LPERR09G12950
I
0.000
Pavir.J03893
Panicum virgatum
Pavir.J03893
I
0.000
GRMZM2G124011
Zea mays
GRMZM2G124011
I
0.000
GRMZM2G069146
Zea mays
GRMZM2G069146
I
0.000
GRMZM2G069126
Zea mays
GRMZM2G069126
I
0.000
BRADI4G35650
Brachypodium distachyon
BRADI4G35650
I
0.000
BRADI4G35630
Brachypodium distachyon
BRADI4G35630
I
0.000
BRADI4G35580
Brachypodium distachyon
BRADI4G35580
I
0.000
Pavir.J27101
Panicum virgatum
Pavir.J27101
I
0.000
DREB1H
Oryza indica
BGIOSGA029416
I
0.000
Pavir.J32829
Panicum virgatum
Pavir.J32829
N
0.000
Traes_5BL_5299B6B33
Triticum aestivum
Traes_5BL_5299B6B33
N
0.000
Sb07g025210
Sorghum bicolor
Sb07g025210
N
0.000
BGIOSGA026544
Oryza indica
BGIOSGA026544
N
0.000
ORUFI09G18190
Oryza rufipogon
ORUFI09G18190
N
0.000
ORGLA09G0133000
Oryza glaberrima
ORGLA09G0133000
N
0.000
ORGLA08G0220200
Oryza glaberrima
ORGLA08G0220200
N
0.000
ONIVA09G17880
Oryza nivara
ONIVA09G17880
N
0.000
OGLUM08G23770
Oryza glumaepatula
OGLUM08G23770
N
0.000
GRMZM2G175856
Zea mays
GRMZM2G175856
N
0.000
DREB1B
Oryza indica
BGIOSGA029417
N
0.000
BGIOSGA026545
Oryza indica
BGIOSGA026545
N
0.000