CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PISMIDRAFT_89773
(
Pisolithus microcarpus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PISMIDRAFT_89773
T332046_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIK29231
Sox
159
228
PKLAPSAWQLYFTDWIQRHQATSTRKLNVAQAAKEAGQEYANLSPEQKEPYKQRSLLLKQARERENEAYL
KIK29231
Sox
263
335
PKKPLSAYFMFLQHIRSDPVLVREIFGDEQETTKQSVLAAAKWRSMTDEERKPFLAQAEQEKLEYEAARRLYE
Links
Other
Sox
family TFs
Other
Pisolithus microcarpus
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ubtfl
Danio rerio
ENSDARG00000038780
N
ubtfl
Gasterosteus aculeatus
ENSGACG00000001504
N
ENSGMOG00000009475
Gadus morhua
ENSGMOG00000009475
N
ENSLACG00000008118
Latimeria chalumnae
ENSLACG00000008118
N
ENSLOCG00000010224
Lepisosteus oculatus
ENSLOCG00000010224
N
ENSONIG00000014037
Oreochromis niloticus
ENSONIG00000014037
N
ubtfl
Tetraodon nigroviridis
ENSTNIG00000003066
N
ubtfl
Takifugu rubripes
ENSTRUG00000009527
N
ENSXMAG00000012822
Xiphophorus maculatus
ENSXMAG00000012822
N
1715211A
Xenopus laevis
1715211A
N